Macrococcus armenti: LAU42_04835
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Entry
LAU42_04835 CDS
T07974
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mary
Macrococcus armenti
Brite
KEGG Orthology (KO) [BR:
mary00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mary03032
]
LAU42_04835 (topA)
03400 DNA repair and recombination proteins [BR:
mary03400
]
LAU42_04835 (topA)
Enzymes [BR:
mary01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LAU42_04835 (topA)
DNA replication proteins [BR:
mary03032
]
Prokaryotic type
DNA Topoisomerases
LAU42_04835 (topA)
DNA repair and recombination proteins [BR:
mary03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LAU42_04835 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF2996
Toprim_4
Auto_anti-p27
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UBH23270
LinkDB
All DBs
Position
931089..933158
Genome browser
AA seq
689 aa
AA seq
DB search
MQLAENLVIVESPAKAKTIEKYLGKKFKVVASMGHVRDLPRSQMGVDTENDFDPRYITIR
GKGPIVQELKKHAKRAKHVYLASDPDREGEAIAWHLAHILNIDEQADSRVVFNEITKDAV
KESFKHPRKIEQNLVDAQQARRVLDRLVGYNISPVLWKKVKKGLSAGRVQSVALKLIIDR
EEEINAFKPEEYWTIDGLFEFKKKQFKAKFLHEQNKPKKLKQESDVKAIVSQLKSDQFKV
TDVTKKEKLRNPAQPFTTSSLQQEAARKLNFKARKTMMLAQQLYEGIDLKKQGTVGLITY
MRTDSTRISDTAKNEAASYIEAQYGKEYLSKRKGKSGGAQDAHEAVRPTSVLRTPNDMKP
FLSRDQLRLYKLIWERFMASQMAAAVIDTVSVDLVQDNIKFRANGQTVKFKGFMSVYIEG
QDEESDEGENKLPVLSVGDEVKAVNIDENQHFTQPPPRYTEARLVKTLEEKGIGRPSTYA
PTLDTIQKRNYVKVDQKKFYPTELGIIVNESVKEYFPEIIDIDFTVNMETLLDKIASGDM
DWKKVIATFYGDFKTHVERAESEMEKIEIKDEPAGEDCEKCGSPMVYKMGRYGKFMACSN
FPDCRNTKAIVKTIGVPCPKCKDGEVVERKSKKNRIFYGCNNFPECDYLSWDKPIARNCP
KCETQLVERKKGKQTQVVCTNCDYDEKPQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
gtgcaattggcagaaaatctcgtcattgttgaatcgcctgcaaaagctaaaacaatcgaa
aagtatttaggaaagaaatttaaagtcgtcgcatcgatgggccatgtgcgtgatttacca
cgtagtcagatgggcgttgatactgagaatgattttgatccaagatatattacgataaga
ggtaaagggccaatcgttcaggagttaaaaaaacatgcaaagcgtgcaaaacatgtttat
cttgcgagtgacccggaccgcgaaggtgaagcaattgcgtggcatttagcacacatatta
aatatagatgaacaagctgacagtcgtgtcgtatttaacgaaataacgaaagatgcagtt
aaagaaagttttaaacatccaagaaaaattgagcagaatttagttgatgctcagcaggca
cgccgagttcttgatcgattagtaggttataatatttcgccagtattatggaaaaaggtg
aaaaaaggactgtctgcaggtcgtgttcaatctgtagccctgaaactcatcattgataga
gaagaagaaatcaatgcatttaagcctgaagaatactggacgattgatggtttattcgaa
tttaaaaagaagcaattcaaagctaagtttttacatgaacagaataaacctaaaaagttg
aagcaggaaagtgatgttaaagcgatcgtttcacagctgaaatcagaccagtttaaagta
acggacgttacgaaaaaggaaaagttaagaaacccggcacagccatttacgacaagttca
cttcaacaggaagctgcacgtaaactgaattttaaagcgagaaaaacgatgatgcttgcg
cagcagttatatgaagggattgacttgaaaaaacaagggacggtcggtttaattacatat
atgcgtacagattcaacgcgtatttctgataccgctaaaaatgaagcggcatcgtatatt
gaagcgcagtatggcaaggaatatttgtctaaacgtaaaggtaagagtggaggcgcacag
gatgcgcatgaagcggtgcgtccaacgtctgtactccgtacaccaaatgatatgaaacca
tttttatcacgagaccagctgagactttataaactcatttgggaacgttttatggcgagt
cagatggcagcagcagtaattgatactgtgagtgttgatctcgtacaggataatattaaa
tttcgtgctaatggtcagactgttaaatttaaaggatttatgagtgtgtatattgaagga
caggatgaagaatctgatgaaggtgaaaacaagctaccagttctgtcagtcggtgatgaa
gttaaagcagtgaatattgatgaaaatcaacatttcacacaaccaccaccacgctacact
gaagcgcgtcttgtaaaaactttagaagaaaagggaatcggtcgtccgtcaacatatgca
ccaacattagatacgattcaaaaacgaaattatgttaaagtagatcagaaaaaattctat
ccgacagaactcggtatcatcgttaacgaatctgttaaagaatattttcctgaaattata
gatattgatttcacagtaaatatggaaacgttactcgataaaattgcaagtggagacatg
gactggaagaaagtaattgcgacattctacggtgactttaaaacacatgttgaacgcgct
gagtctgaaatggagaaaatcgaaattaaagatgagcctgcaggagaagattgtgagaaa
tgcggttcacctatggtatataaaatggggcgctacggtaagttcatggcttgctctaac
ttcccggactgtagaaatacgaaggcaatcgttaaaacaatcggcgttccttgtcctaaa
tgtaaagatggagaagtcgttgaacgtaaatcaaagaaaaacagaattttctatggatgt
aacaacttccctgaatgtgattatttatcgtgggataaaccgattgcacgaaattgtccg
aaatgtgaaacacaactcgttgaacgtaagaaaggtaaacagacgcaagtggtttgtaca
aattgtgactacgacgaaaagccacaataa
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