KEGG   Macrococcus armenti: LAU42_06005
Entry
LAU42_06005       CDS       T07974                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
mary  Macrococcus armenti
Brite
KEGG Orthology (KO) [BR:mary00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mary03032]
    LAU42_06005
   03036 Chromosome and associated proteins [BR:mary03036]
    LAU42_06005
   03400 DNA repair and recombination proteins [BR:mary03400]
    LAU42_06005
DNA replication proteins [BR:mary03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    LAU42_06005
Chromosome and associated proteins [BR:mary03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    LAU42_06005
DNA repair and recombination proteins [BR:mary03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      LAU42_06005
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 DUF2267 HU-CCDC81_euk_1 Rpf1_C
Other DBs
NCBI-ProteinID: UBH21364
LinkDB
Position
complement(1164036..1164308)
AA seq 90 aa
MNKTDLINAVADSANLTKKEAGLAVDAVFESIQKSLSNGEKVQLIGFGNFEVRERAARKG
RNPQTGDEIEIPASKVPAFKAGKALKDAVK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaaacagatttaatcaatgctgttgctgatagcgctaacttaactaagaaagaa
gctggtttagcagtagatgctgttttcgaatcaattcaaaaatcattatctaatggtgag
aaagtacaattaattggtttcggtaactttgaagttcgcgaacgtgctgcacgtaaagga
cgtaatccgcaaactggtgatgaaattgaaatcccagcaagcaaagttccagcattcaaa
gctggtaaagcattaaaagatgcagttaaataa

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