Macrococcus armenti: LAU42_10380
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Entry
LAU42_10380 CDS
T07974
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mary
Macrococcus armenti
Pathway
mary03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mary00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LAU42_10380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mary03019
]
LAU42_10380
03009 Ribosome biogenesis [BR:
mary03009
]
LAU42_10380
Enzymes [BR:
mary01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LAU42_10380
Messenger RNA biogenesis [BR:
mary03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LAU42_10380
Ribosome biogenesis [BR:
mary03009
]
Prokaryotic type
rRNA helicases
LAU42_10380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
UBH22132
LinkDB
All DBs
Position
complement(1923033..1924526)
Genome browser
AA seq
497 aa
AA seq
DB search
MQKFRDLGISEPTINALEKMGFTEPTPIQTDSIPHTMAGRDVLGQAQTGTGKTGAFGIPL
IEKVKGREGIQSLILAPTRELAVQVADQLKAFSRGQGVQVTTVFGGMPIDRQIRELKKKP
QIVVGTPGRVIDHLNRRTLKTEDINTLILDEADEMMNMGFIDDMRFIMDKLPKENRQTML
FSATMPKAIQELVQKFMKNPIIVKTMTNIDSDPSIEEFYTIVKELEKFDTFTNFLDVHQP
ELAIVFGRTKRRVDELTSALISKGYRAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVA
ARGLDISGVTHVYNFDIPQDVESYTHRIGRTGRAGKHGMAISFVNPVEMDYIRQIEKAKN
RQMQALRPPTPGEVMKAREQDVKSKVKAWIEVDTEARIESIAKELIEEYGDVKLVASLLQ
ELIQSNNDVDVQLTFEKPLGRKGGGKSYRGGRSGNRSGGGRNRKDGKDNRRKAFDRGNKG
PKAKKSFKGRTFADHKK
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaatttagagacctaggtatcagcgaacctaccataaatgcgctggagaagatg
ggatttacagaacctacaccgattcaaacggatagtatccctcatacaatggcaggccgt
gacgtattaggccaagcgcaaactggtactggtaagactggtgctttcggaattccttta
attgaaaaagttaaaggccgtgaagggatccaaagtttaatcctggcgccgacacgtgaa
ttagcagttcaagttgcagaccaacttaaagcattcagtcgtggacaaggcgttcaagtt
actactgtattcggtggtatgccaatcgaccgtcaaattagagaacttaagaaaaaacct
caaatcgtagtaggaacaccaggacgtgttatcgaccatttaaaccgtcgtacattaaaa
actgaagatattaacacgttaatcttagacgaagctgatgaaatgatgaacatgggattc
atcgatgatatgcgttttatcatggataaattaccaaaagaaaatcgtcagacgatgctt
ttctcggcaacaatgcctaaagcaattcaggaacttgttcagaagttcatgaaaaacccg
attatcgttaaaacgatgacaaacatcgattcagacccttcaattgaagagttttataca
atcgttaaagaattagagaagttcgatacatttacaaacttcttagatgtacaccaacct
gaacttgcaattgtattcggacgtacgaaacgtcgtgttgatgaattaacgagcgcttta
atttctaaaggttaccgtgcagaaggtttacacggtgatattactcaggcgaaacgtcta
gaagtattaaagaaatttaaaaacgatcaaatcgatattcttgttgcgacagacgttgca
gcacgtggattagatatttcaggtgtaacacacgtatacaactttgatatcccacaagac
gttgaaagttatacacaccgtatcggacgtacaggtcgtgcgggtaaacatggtatggca
atttcattcgtaaacccggttgaaatggattacatccgtcaaatcgaaaaagcgaagaat
cgtcaaatgcaggcattacgtccaccaacaccaggtgaagtaatgaaagcacgtgagcag
gatgttaaatctaaagttaaagcttggattgaagtagatacagaagcgcgtatcgaatca
atcgcaaaagaattaattgaagaatatggtgatgtgaaattagtagcatcattattacag
gaattaattcaatctaacaacgatgttgacgttcagttaacatttgaaaaaccacttggt
cgtaaaggtggcggtaaatcttatcgcggtggccgttcaggtaaccgttctggtggtgga
cgcaaccgtaaagacggtaaagacaaccgtcgtaaagcatttgatcgtgggaataaagga
ccgaaagcgaaaaagtcattcaaaggcagaacatttgctgatcataagaagtaa
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