Macrococcus armenti: LAU42_10590
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Entry
LAU42_10590 CDS
T07974
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mary
Macrococcus armenti
Pathway
mary03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mary00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LAU42_10590 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mary03021
]
LAU42_10590 (rho)
03019 Messenger RNA biogenesis [BR:
mary03019
]
LAU42_10590 (rho)
Transcription machinery [BR:
mary03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LAU42_10590 (rho)
Messenger RNA biogenesis [BR:
mary03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LAU42_10590 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
Mor
S1CSD-TOTE-2
AAA
AAA_24
Motif
Other DBs
NCBI-ProteinID:
UBH22168
LinkDB
All DBs
Position
complement(1956520..1957836)
Genome browser
AA seq
438 aa
AA seq
DB search
MTEKVRTSPQYESFHELYKNHTTKALTQRAKELGLVNYSKLNKKELVLAIMEKQMEKDGN
YYMEGILDDIQPDGYGFLRTVNYSKGEKDIYISASQIRRFEIKKGDKVTGKVRKPKENEK
YYGLLQVDFVNDQNAEEVKKRPHFQALTPLYPEERIRLETTKTAYSTRIMDLVTPIGFGQ
RGMIVAPPKAGKTSLLKEIANAISVNHPEAKLFILLIGERPEEVTDLERSVEAAEVVHST
FDEPPEHHVKVAELLLERAKRLVEIGEDVIILMDSITRLARAYNLVIPPSGRTLSGGLDP
ASLHKPKAFFGAARNIEAGGSLTILSTALVETGSRMDDMIYEEFKGTGNMELTLDRKLAE
KRIYPAIDIRRSSTRKEELLLDKKELEMIWQLRNLFTDSPDFTERFLRRLKQSDSNEDFF
KQLGERMVESAKTGKPII
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaaagttagaacaagcccgcagtatgaatctttccatgagttgtataaaaat
catacaacaaaagcattgacgcaacgtgcgaaagagcttggacttgtaaattacagtaaa
ttaaataaaaaagaacttgtgttagccattatggaaaaacagatggaaaaagacggtaac
tactatatggaaggtattcttgatgatatccagccggatgggtacggttttttaagaact
gttaactattcaaaaggtgaaaaagatatatacattagtgcgagtcagattcgtcgtttt
gaaattaagaaaggtgacaaagttacaggtaaagttcgtaaacctaaagaaaatgaaaag
tattacggcttactgcaagtcgactttgtaaacgatcagaatgcagaagaagtaaagaaa
cgcccacacttccaggcgctaacgccgctttatccagaagagcgtattcgtcttgaaacg
actaagacagcttattcaacacgtattatggatttagtaacgccgataggcttcggacag
cgtggtatgattgtcgcgccaccgaaagcaggtaaaacatcactgcttaaagaaattgca
aacgcaatttcggtaaaccatcctgaagcgaagttgtttatattgcttattggtgaacgt
ccagaggaagtgacggatttagagcgttctgtagaagcggcagaagtagtgcattctaca
ttcgatgagccgccggaacaccatgtgaaagttgcggaacttttattagaacgtgcgaaa
cgtctcgttgaaatcggtgaagatgttattatattgatggactcgattacgcgattagca
cgtgcatataacttagtaattccaccgagtggtcgtacattatcaggtggtcttgatcca
gccagtctgcataaaccgaaagctttttttggagcggcacgtaatatagaggccggagga
agtttaacaatcttatcaacagcacttgttgaaactggtagtcgtatggatgatatgata
tacgaagagtttaaaggtacaggaaacatggaacttacacttgaccgtaaacttgcagaa
aaacgtatatatccagcgattgatattcgtcgcagctcaacgcgtaaagaagaactgctg
ttagataagaaggaacttgagatgatctggcaacttcgtaatttatttacagatagtccc
gattttacagaacgcttcttaagaagattgaagcagagcgattctaatgaagacttcttt
aagcagttaggtgaacgcatggtagaaagtgcgaaaacaggtaaaccgattatataa
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