Mycolicibacterium arabiense: MARA_12870
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Entry
MARA_12870 CDS
T07049
Symbol
dnaE1
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
marz
Mycolicibacterium arabiense
Pathway
marz03030
DNA replication
marz03430
Mismatch repair
marz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
marz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MARA_12870 (dnaE1)
03430 Mismatch repair
MARA_12870 (dnaE1)
03440 Homologous recombination
MARA_12870 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marz03032
]
MARA_12870 (dnaE1)
03400 DNA repair and recombination proteins [BR:
marz03400
]
MARA_12870 (dnaE1)
Enzymes [BR:
marz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MARA_12870 (dnaE1)
DNA replication proteins [BR:
marz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MARA_12870 (dnaE1)
DNA repair and recombination proteins [BR:
marz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MARA_12870 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
BBY47819
UniProt:
A0A7I7RV25
LinkDB
All DBs
Position
complement(899788..903318)
Genome browser
AA seq
1176 aa
AA seq
DB search
MSGSFVHLHNHTEYSMLDGAAKVKHMFAEANRLEMPALGMTDHGNMFGASEFYNAAIDAN
VKPIIGVEAYIAPASRFDTKRVQWGDPSQKGDDVSGSGAYTHMTMVAENATGLRNLFKLS
SLASFEGQLGKWSRMDAELIAEHSSGIIATTGCPSGEVQTRLRLGHQREALEAAAKWREI
FGPENFFLELMDHGIEIERRVRDGLLEVGRKLGIPPLATNDCHYVTKEASRNHEALLCVQ
TGKTLSDPARFKFDGDGYYLKSAADMRALWDDEVPGACDSTLLIAERVQPYADVWAPKDR
MPVFPVPDGHDEASWLAHEVTAGLQRRFPAGVPTEYTDRAAYEIKVICDKGYPSYFLIVA
DLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPITYGLLFERFLNPERASMPDIDID
FDDRRRGEMLRYAANKWGSDRVAQVITFGTIKTKAALKDSARVNYGQPGFAIADRITKAL
PPPIMAKDIPLSGITDPAHERYKEAAEVRALIDTDSDVRTIYETARGLEGLVRNAGVHAC
AVIMSSEPLVDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDCIENIQ
ANRGIELDLDAIPLDDPATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTVFEDVVAVIAL
YRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILSETYGLIVYQEQIMRIAQKVA
GFSLARADILRKAMGKKKREVLEKEFEGFSEGMKSNGFSAAAVKALWDTVLPFADYAFNK
SHAAGYGLVSYWTAYLKANFPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVNE
SVLNFASVGADIRFGLGAVRNVGANVVSSLINTRTEKGKYTDFSDYLNKIHITACNKKVT
ESLVKAGAFDSLGHSRKGLFLIHTDAVDSVLGTKKAEAMGQFDLFGGADTATDAVFTIKV
PEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTQIPAILDGDVAADTQVRVGG
ILASVNRRVNKNGLPWASAQLEDLTGGIEVMFFPQTYATFGGDIADDAVVIIGAKVNARD
DRLSLIVNDLVVPDFSSAQADRPLAVSLPTRQCTVEKVTALKQVLANHPGTSQVHLRLIS
GDRITTLELDQTLRVTPSSALMGDLKALLGPGCLGG
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgagcggatccttcgtgcacctgcacaaccacaccgaatactccatgctcgacggtgcg
gcgaaggtcaagcacatgttcgccgaggccaaccggctcgagatgcccgcgctcgggatg
accgaccacggcaacatgttcggggccagcgagttctacaacgctgcgatcgatgcgaac
gtcaagccgatcatcggcgtggaggcgtacatcgccccggcgtcgcgattcgacaccaag
cgcgtgcagtggggcgatcccagccagaagggtgacgacgtctcgggcagcggcgcctac
acgcacatgaccatggtcgcggagaacgcgaccggactgcgcaacctgttcaagttgtcc
tcgctggcgtcgttcgagggccagctcggcaagtggtcgcggatggacgccgagctgatc
gccgagcactcctcgggcatcatcgccaccaccggctgcccgtccggcgaagtgcagacc
cggctccgtctcggccaccagcgcgaagcgctcgaggccgcggcgaaatggcgtgagatc
ttcgggccggagaacttcttcctcgaactcatggaccacggcatcgagatcgaacgtcgg
gtgcgggacggcctgctcgaggtgggtcgcaagctcggcattccgccgttggcgaccaac
gactgccactacgtcaccaaggaggcgtcgcggaaccacgaggcgctgctctgcgtccag
acgggcaagacgctgtcggaccccgcgcgcttcaagttcgacggtgacggttactacctc
aagtcggccgcggacatgcgggcactgtgggacgacgaggtgcccggcgcatgcgactcc
acgctgctgatcgccgaacgcgttcagccctacgccgacgtttgggcacccaaggaccgt
atgccggtgttcccggtacccgacggccacgacgaggcgtcgtggctcgcccacgaggtc
accgcgggtttgcagcgacggtttcccgccggtgtgcccaccgagtacaccgaccgggcc
gcgtacgagatcaaggtcatctgcgacaagggatatccgtcctacttcctgatcgtcgcc
gacctcatcaactacgcccgctccgtcgacatccgggtgggccccggccgtgggtccgcc
gccggttcgctggtcgcgtacgccatgggcatcaccaacatcgacccgatcacctacggg
ctgctgttcgagcggttcctcaaccccgagcgcgcgtcgatgcccgacatcgacatcgac
ttcgacgatcgccgccgcggcgagatgctgcgctacgcggcgaacaagtggggcagcgac
cgggtggcccaggtcatcacgttcggcaccatcaagaccaaggccgcactgaaggactcg
gcccgggtgaactacggccagcccgggttcgcgatcgccgaccggatcaccaaggcgctg
ccgccaccgatcatggccaaggacattccgctctcgggcatcaccgacccggctcacgag
cggtacaaggaggccgcggaggtccgcgcgctcatcgacaccgattcagacgtgcggacc
atctacgagaccgcgcgcggcctcgagggtctggtccgcaacgcaggcgtgcacgcctgc
gcggtgatcatgagttccgagccgctcgtcgatgccattccactgtggaagcggccccag
gacggcgcgatcatcacggggtgggactacccgtcgtgtgaggccatcggcctgctcaag
atggacttcctcggcctgcggaacctgacgatcatcggtgactgcatcgagaacatccag
gccaaccgcggcatcgagctggacctcgacgcaatcccgctcgacgaccccgccacctac
gagctgctcggcaggggtgacaccctcggggtgttccagctcgacggtgggccgatgcga
gatctgctgcggcgcatgcagccaacggtcttcgaggacgtcgtggccgtgatcgcgctg
taccggcccggtcccatgggcatgaacgcccacaacgactacgccgaccgcaagaacaac
cgccaggccatcaagccgatccacccggaactcgaggagccgctgcgcgagatcctctcg
gagacctacggcctgatcgtctaccaagagcagatcatgcgcatcgcgcagaaggtcgcc
ggcttctcgctcgcccgagccgacatcctccgcaaggccatgggcaagaagaagcgcgag
gtcctggagaaggagttcgagggcttctccgagggcatgaagtccaacggcttctccgcg
gcggcggtcaaggcgctctgggacaccgtcctcccgttcgccgactacgcgttcaacaag
tcgcacgccgccggctacgggctggtgtcgtactggacggcctacctgaaggcgaacttc
cccgcggagtacatggcgggcctgctcacctcggtcggcgacgacaaggacaaggcggcg
gtgtacctggccgactgccgcaggctcggcatcaccgtgctcccgccggacgtcaacgag
tcggtgctcaacttcgcctcggtcggcgccgacatcaggttcgggctgggggcggtgcgc
aacgtgggcgccaacgtcgtcagttcactgatcaacacccgcaccgagaagggcaagtac
accgacttctcggactacctcaacaagatccacatcaccgcctgcaacaagaaggtgacg
gagtcgctggtcaaggccggtgcgttcgactcactcgggcactcccgcaaggggctgttc
ctgatccacaccgatgcggtcgactcggttctcggcaccaagaaggccgaggcgatgggg
cagttcgacctgttcggcggtgctgacacggcgaccgatgcggtgttcacgatcaaggtt
cccgaggacgagtgggaggacaagcacaaactcgcactggagcgagagatgctgggtctg
tacgtatccgggcaccccctcaacggggtcgcgcacctgcttgccgcgcaggtggacacg
cagatccccgcgatcctcgacggggacgtcgccgcggacacccaggtgcgcgtcggcggg
atcctggcgtcggtgaaccgccgggtgaacaagaacggattgccctgggcgtcagcccaa
ttggaggacctcaccggtggcatcgaggtgatgttcttcccgcaaacctacgccaccttc
ggcggtgacatcgccgacgacgcagtggtgatcatcggcgccaaggtcaatgcccgcgac
gaccgattgtcgctgatcgtcaacgacctcgtggtcccggacttctccagcgcccaggcc
gaccgcccgctcgcggtgagcctgccgacccggcagtgcaccgtcgagaaggtgacggca
ctcaagcaggtcctcgccaatcaccccggcacctcacaggtgcacctgcggctgatcagt
ggcgaccggatcacgacgctggaactggatcagacgctgcgcgtcacgccgtcgtcggcg
ttgatgggtgatctgaaggcgctgctcggaccgggctgcctgggcggctga
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