Mycolicibacterium arabiense: MARA_16130
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Entry
MARA_16130 CDS
T07049
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
marz
Mycolicibacterium arabiense
Pathway
marz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
marz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MARA_16130 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
marz03021
]
MARA_16130 (rpoD)
Transcription machinery [BR:
marz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MARA_16130 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
BBY48145
UniProt:
A0A7I7RWK1
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All DBs
Position
1243468..1244934
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AA seq
488 aa
AA seq
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MAHAHATDRKTEGVPVAATKVEHDTEEPAKRAATKAPAKKAAAKAPAKKATKSVRAKADS
PAAAKKAAGRAPRAKTDAAKKGAEDDVESTELDGADVLEGEPADIEVEEADLELDDLDGD
DAEVAPTDKPVAKVAEPAKADAEEADEDITEPTEKDKASGDFVWDEEESEALRQARKDAE
LTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAGLYATQKFAEFAEKGEKITTQVRRD
YQWIQRDGDRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKG
YKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELA
KEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQL
QSVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRS
QVLRDYLD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcacgcccacgccaccgaccgcaagaccgaaggggtgcccgtggcagcgacgaag
gtagagcacgacaccgaagagcctgcgaagcgcgcggccacgaaggcgccggccaagaag
gcagctgccaaggctcccgcgaagaaggcgacgaagtcggttcgcgccaaggccgattcc
ccagcagccgcgaagaaggccgctggccgcgcaccgcgcgccaagaccgacgcagccaag
aagggtgccgaggacgacgtcgagtcgaccgaactcgacggtgccgacgtactcgaaggc
gaaccggccgacatcgaggtcgaggaagccgatctcgaactcgacgacctcgacggtgac
gacgccgaggtggcgcctaccgacaagccggtggccaaggtcgccgagcccgcgaaggcc
gatgccgaggaagccgacgaggacatcaccgagccgaccgagaaggacaaggcctccggt
gacttcgtatgggacgaagaggaatccgaggcgctgcgccaggcccgcaaggacgccgaa
ctcaccgcctccgccgactcggtccgcgcgtacctgaagcagatcggcaaggtcgccctg
ctgaacgccgaggaagaggtcgagctggccaagcgcatcgaggccggcctctatgcgacg
cagaagttcgccgagttcgccgagaagggcgagaagatcacgacgcaggtgcgtcgtgac
taccagtggattcagcgtgacggcgaccgggcgaagaaccacctgctcgaggccaacctg
cgtctggtggtgtcgctggccaagcgctacaccggtcgtggcatggcgttcctggatctc
atccaggagggcaacctcggcctgatccgcgcggtcgagaagttcgactacaccaagggc
tacaagttctccacgtacgccacgtggtggatccgccaggccatcacccgcgccatggcc
gaccaggcccgcaccatccgcatcccggtgcacatggtcgaggtcatcaacaagctcggc
cgcatccagcgcgagctgctccaggacctgggccgcgagcccacgccagaagagctggcc
aaggaaatggacatcacgcccgagaaggtgctggagatccagcagtacgcgcgtgagccg
atctcgctggaccagacgatcggcgacgagggcgacagccagctcggcgacttcatcgag
gactccgaggccgtggtggccgttgacgcggtgagcttcaccctgctgcaggatcagctg
cagtcggtgctggagacgctgtccgagcgcgaggcaggcgtggtccggctgcgcttcggc
ctcaccgacgggcagccccgcaccctcgacgagatcggccaggtctacggcgtcacgcga
gagcgcatccgccagatcgagagcaagacgatgtcgaagttgcgccaccccagccgttct
caggtgctgcgcgactacctggactag
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