KEGG   Mycolicibacterium arabiense: MARA_16840
Entry
MARA_16840        CDS       T07049                                 
Symbol
rnj
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
marz  Mycolicibacterium arabiense
Pathway
marz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:marz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MARA_16840 (rnj)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:marz03019]
    MARA_16840 (rnj)
Messenger RNA biogenesis [BR:marz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MARA_16840 (rnj)
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B_2 Lactamase_B Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: BBY48216
UniProt: A0A7I7RW60
LinkDB
Position
complement(1315436..1317124)
AA seq 562 aa
MTVPSAALTPPKPLAPGGLRVTALGGIGEIGRNMTVFEHLGRLLIVDCGVLFPNHDEPGV
DLILPDLRHVENRLDDIEAMVITHAHEDHIGAIPHLLKLRPDIPVVGSKFTLALIEAKCR
EHRIKPVFVEVAEKQSSRHGVFECEYFAVNHSIPDALAIAVYTGAGTVLLTGDIKLDQLP
LDGRPTDLPGMSRLGDAGVDLFLCDSTNADIPGVGPSESEIGPNMHRLIRSAEGRVIVAC
FASNVARVQQIIDASVALGRKVSFVGRSMVRNMGIARELGFLNVHPDNVVDIAAAEMLPP
DRVVLVTTGTQGEPMAALSRMSRGEHRSITLTDGDLVVLSSSLIPGNEEAIYGVIDSLAK
IGVRVVTNAQVRIHVTGHAYAGELLFLYNGIRPRNVMPVHGTWRHLRANAGLAVKSGVPP
ENVMLAENGVSVDLVAGKASIAGAVPVGKMFVDGLVTGDVGDTTLGERLTLTSGFIAINV
VIKRATGKRAAPPQLHSRGFSEDPKALEPAARKVEEALDALAAEKITDPARIAQAVRRAV
GKWVGEVYRRQPMIVPTVLEID
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgaccgtcccctccgcagcactgacacccccgaagccgctggctcctggcgggctgagg
gtcaccgcgctcggcggcatcggcgagatcggccgcaacatgacggtgttcgagcacctc
ggtcgcctgctgatcgtcgactgcggagtcctgttccccaatcacgacgaacccggcgtc
gacctgatcctgcccgacctgcggcacgtggagaaccggctcgacgacatcgaggcgatg
gtcatcacccacgcccacgaagaccacatcggggccatcccccatctgctgaagctgcgg
cccgacatcccggtcgtgggctcgaagttcacgctcgccctgatcgaggcgaagtgccgc
gagcaccggatcaagccggtgttcgtggaggtcgccgagaagcagagcagtaggcacggc
gtgttcgagtgcgagtacttcgcggtcaaccactcgatcccggacgcactcgcgatcgcc
gtgtacaccggcgcgggaaccgttctgctgactggtgacatcaagctcgaccagctgccg
ctcgacggccggccgacggacctgcccggcatgtcccgcctcggcgacgcaggcgttgac
ctgttcctgtgcgactcgacgaatgccgacatccccggcgtcgggccgtcggagagcgag
atcgggcccaacatgcaccgcctgatcaggtcggccgagggtcgggtgatcgtggcgtgc
ttcgcctccaacgtcgctcgcgtgcaacagatcatcgatgcgtcggtggcgttgggccgg
aaggtgtcgttcgtcggacgctccatggtgcgcaacatgggcatcgcccgggaactgggt
tttctcaacgtccatcccgacaacgtcgtcgacatcgcggccgccgagatgctgccgccc
gaccgcgtggtgctggtcaccaccggcacgcagggcgaacccatggctgcgctgtcgcgg
atgtcgcgcggtgagcaccgcagcatcacgctgaccgacggtgacctcgtggtgctctcg
tcgtcgctgattcccggcaacgaagaggcgatctacggcgtcatcgactcgctggccaag
atcggcgtccgcgtcgtcaccaatgcccaggtgcgcatccacgtcacgggccacgcctac
gccggcgaactcctgttcctgtacaacggcattcgtccccgcaacgtcatgccggtgcat
ggcacgtggcggcacctgcgtgccaacgccggccttgcggtgaagtcgggtgtgccgccc
gagaacgtcatgctcgccgagaacggcgtcagcgtggacctggtggcgggcaaggcgtcc
atcgcgggggcggtgcccgttggcaagatgttcgtcgacggtctggtgaccggcgacgtc
ggcgacaccacgctgggcgagcgcctcacgctgacatcgggtttcatcgcgataaacgtg
gtgatcaagcgcgccacggggaagcgggcggcaccgccgcagctgcactcccgcggtttc
tccgaggacccgaaggccctcgaaccggccgcgcgcaaggtggaggaggcgctcgacgcc
ctcgccgccgagaagatcaccgatccggcccgcatcgcccaggccgtccgccgcgcggtg
ggcaagtgggtcggcgaggtgtaccgccgccagccgatgatcgtgcccacggtcctcgag
atcgactga

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