Mycolicibacterium arabiense: MARA_16840
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Entry
MARA_16840 CDS
T07049
Symbol
rnj
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
marz
Mycolicibacterium arabiense
Pathway
marz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
marz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MARA_16840 (rnj)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
marz03019
]
MARA_16840 (rnj)
Messenger RNA biogenesis [BR:
marz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MARA_16840 (rnj)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BBY48216
UniProt:
A0A7I7RW60
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Position
complement(1315436..1317124)
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AA seq
562 aa
AA seq
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MTVPSAALTPPKPLAPGGLRVTALGGIGEIGRNMTVFEHLGRLLIVDCGVLFPNHDEPGV
DLILPDLRHVENRLDDIEAMVITHAHEDHIGAIPHLLKLRPDIPVVGSKFTLALIEAKCR
EHRIKPVFVEVAEKQSSRHGVFECEYFAVNHSIPDALAIAVYTGAGTVLLTGDIKLDQLP
LDGRPTDLPGMSRLGDAGVDLFLCDSTNADIPGVGPSESEIGPNMHRLIRSAEGRVIVAC
FASNVARVQQIIDASVALGRKVSFVGRSMVRNMGIARELGFLNVHPDNVVDIAAAEMLPP
DRVVLVTTGTQGEPMAALSRMSRGEHRSITLTDGDLVVLSSSLIPGNEEAIYGVIDSLAK
IGVRVVTNAQVRIHVTGHAYAGELLFLYNGIRPRNVMPVHGTWRHLRANAGLAVKSGVPP
ENVMLAENGVSVDLVAGKASIAGAVPVGKMFVDGLVTGDVGDTTLGERLTLTSGFIAINV
VIKRATGKRAAPPQLHSRGFSEDPKALEPAARKVEEALDALAAEKITDPARIAQAVRRAV
GKWVGEVYRRQPMIVPTVLEID
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcccctccgcagcactgacacccccgaagccgctggctcctggcgggctgagg
gtcaccgcgctcggcggcatcggcgagatcggccgcaacatgacggtgttcgagcacctc
ggtcgcctgctgatcgtcgactgcggagtcctgttccccaatcacgacgaacccggcgtc
gacctgatcctgcccgacctgcggcacgtggagaaccggctcgacgacatcgaggcgatg
gtcatcacccacgcccacgaagaccacatcggggccatcccccatctgctgaagctgcgg
cccgacatcccggtcgtgggctcgaagttcacgctcgccctgatcgaggcgaagtgccgc
gagcaccggatcaagccggtgttcgtggaggtcgccgagaagcagagcagtaggcacggc
gtgttcgagtgcgagtacttcgcggtcaaccactcgatcccggacgcactcgcgatcgcc
gtgtacaccggcgcgggaaccgttctgctgactggtgacatcaagctcgaccagctgccg
ctcgacggccggccgacggacctgcccggcatgtcccgcctcggcgacgcaggcgttgac
ctgttcctgtgcgactcgacgaatgccgacatccccggcgtcgggccgtcggagagcgag
atcgggcccaacatgcaccgcctgatcaggtcggccgagggtcgggtgatcgtggcgtgc
ttcgcctccaacgtcgctcgcgtgcaacagatcatcgatgcgtcggtggcgttgggccgg
aaggtgtcgttcgtcggacgctccatggtgcgcaacatgggcatcgcccgggaactgggt
tttctcaacgtccatcccgacaacgtcgtcgacatcgcggccgccgagatgctgccgccc
gaccgcgtggtgctggtcaccaccggcacgcagggcgaacccatggctgcgctgtcgcgg
atgtcgcgcggtgagcaccgcagcatcacgctgaccgacggtgacctcgtggtgctctcg
tcgtcgctgattcccggcaacgaagaggcgatctacggcgtcatcgactcgctggccaag
atcggcgtccgcgtcgtcaccaatgcccaggtgcgcatccacgtcacgggccacgcctac
gccggcgaactcctgttcctgtacaacggcattcgtccccgcaacgtcatgccggtgcat
ggcacgtggcggcacctgcgtgccaacgccggccttgcggtgaagtcgggtgtgccgccc
gagaacgtcatgctcgccgagaacggcgtcagcgtggacctggtggcgggcaaggcgtcc
atcgcgggggcggtgcccgttggcaagatgttcgtcgacggtctggtgaccggcgacgtc
ggcgacaccacgctgggcgagcgcctcacgctgacatcgggtttcatcgcgataaacgtg
gtgatcaagcgcgccacggggaagcgggcggcaccgccgcagctgcactcccgcggtttc
tccgaggacccgaaggccctcgaaccggccgcgcgcaaggtggaggaggcgctcgacgcc
ctcgccgccgagaagatcaccgatccggcccgcatcgcccaggccgtccgccgcgcggtg
ggcaagtgggtcggcgaggtgtaccgccgccagccgatgatcgtgcccacggtcctcgag
atcgactga
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