Mycolicibacterium arabiense: MARA_46520
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Entry
MARA_46520 CDS
T07049
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
marz
Mycolicibacterium arabiense
Brite
KEGG Orthology (KO) [BR:
marz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marz03032
]
MARA_46520 (topA)
03400 DNA repair and recombination proteins [BR:
marz03400
]
MARA_46520 (topA)
Enzymes [BR:
marz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MARA_46520 (topA)
DNA replication proteins [BR:
marz03032
]
Prokaryotic type
DNA Topoisomerases
MARA_46520 (topA)
DNA repair and recombination proteins [BR:
marz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MARA_46520 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Rep_1B
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BBY51184
UniProt:
A0A7I7S2Q9
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All DBs
Position
4375505..4378324
Genome browser
AA seq
939 aa
AA seq
DB search
MADQDGGSGNGRVRRLVIVESPTKARKIAGYLGSNYVVESSRGHIRDLPRAAADVPVKYK
SEPWARLGVNVDADFEPLYIVSPEKKSTVTELKALLKDVDELYLATDGDREGEAIAWHLL
ETLKPRVPVKRMVFHEITEPAIRAAAENPRDLDIDLVDAQETRRILDRLYGYEVSPVLWK
KVAPKLSAGRVQSVATRIIVSRERERMAFRSAGYWDVTAELDASVSDPEASPPKFTAKLN
TVDGRRVASGRDFDSLGGVKKPNEVLVLDQAAATNLATGLRGAQLEVSSVEQKPYTRRPY
PPFMTSTLQQEAGRKLRFSSERTMSIAQRLYENGYITYMRTDSTTLSESAINAARNQARQ
LYGEEYVHPTARQYTRKVKNAQEAHEAIRPAGDVFQTPGQLHAQLDTDEFRLYELIWQRT
VASQMADARGTTLSLRISGTATSGEQVVFNASGRTITFPGFLKAYVETVDEQAGGEADDA
ESRLPNLTQGQRVDAADLTADGHTTSPPARYTEASLIKALEELGIGRPSTYSSIIKTIQD
RGYVHKKGSALVPSWVAFAVIGLLEQHFGRLVDYDFTAAMEDELDQIASGTEQRTNWLNN
FYFGGEHGADGSIARSGGLKKLVGGNLEDIDAREVNSIKLFDDDEGRAVNVRVGRNGPYL
ERMILGEDGEPTPQRANLKDELTPDELTLELAEKLFSTPQEGRSLGVDPESGHEIVAKDG
RFGPYVTEILPPPPEEPDDGAPAKKGKKPVGPKPRTGSLLRSMDIETVTLEDALKLLSLP
RVVGIDPATNEEITAQNGRYGPYLKRGTDSRSLVNEEQMFTITLDEALKIYAEPKRRGRQ
GAATPPLRELGKDPVSEQPMVIKDGRFGPYVTDGETNASLRKGDDVMSITDARASELLAD
RRARGPVKKKAAAKKAPAKKAAKKTPAKKAPAKKAVKKA
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
ttggctgaccaggatggtggcagcggcaacggaagggttaggcgactcgtcatagtcgag
tcgccgaccaaggcgcgcaaaatcgcgggctacctcggctccaactacgtcgtcgaatcg
tcgcgtggacacatccgcgacctacctcgagcagccgccgacgtccccgtgaagtacaag
tcggaaccgtgggcgcgcctcggcgtcaacgtcgacgccgacttcgaacccctctacatc
gtcagcccggagaagaagagcaccgtcaccgaactcaaggcgctgctcaaggacgtcgac
gagctgtacctcgcgacggacggtgaccgcgagggtgaggccatcgcctggcacctgctg
gagacgttgaagccgcgcgtcccggtcaagcggatggtcttccacgagatcaccgagccg
gcgatccgcgcagccgccgagaacccccgcgacctggacatcgacctggtcgacgcccag
gagacccgacgcatcctcgaccgcctctacggctacgaggtcagccccgtgctgtggaag
aaggtggcccctaagctgtcggccggccgcgtgcagtcggtggcgacgcgcatcatcgtg
tcgcgcgagcgggaacgcatggcgttccgcagcgccggctactgggacgtcaccgccgaa
ctcgacgcgagcgtctccgatcccgaggcctcgccgccgaagttcacggcgaagctcaac
accgtcgacggccgccgcgtcgccagcggccgggacttcgactccctcggcggggtcaag
aagcccaacgaagtgctggtgctcgaccaggccgcggccacgaatctcgccacgggcctg
cgcggcgcgcagctcgaggtgtcctcggtcgagcagaagccatacacccgccggccgtac
ccgccgttcatgacgtcgacgctgcagcaggaggccggccgcaagctgcgcttctcctcc
gagcgcacgatgagcatcgcgcagcggctgtacgagaacggctacatcacctacatgcgc
accgactcgacgacgctgtccgagtcggccatcaacgccgcccgcaaccaggcccgccag
ctctatggcgaggagtacgtccacccgacggcgcgccagtacacccgcaaggtgaagaac
gcgcaggaggcccacgaggccatccgaccggccggcgacgtgttccagacgccaggccag
ctgcacgcgcagctcgataccgacgaattccggctctacgagctgatctggcagcgcacc
gtggcatcgcagatggccgacgcgcgcggcacgacgctgtcgctgcggatctctggcaca
gccacctccggcgagcaggtcgtcttcaacgccagcggccgcaccatcacgttccccggc
ttcctcaaggcgtacgtcgagaccgtcgacgagcaggcgggcggcgaggccgacgacgcc
gagagcaggctgcccaacctcacccagggccagcgcgtcgacgccgccgacctgaccgcc
gacggccacaccacgagcccgcccgcccgctacaccgaggcctcgctgatcaaggcgctg
gaagaactcggcattggtcgcccgtcgacgtactcctcgatcatcaagacgatccaggac
cgcgggtacgtgcacaagaagggcagcgcgctggtgccgtcctgggtggcgttcgccgtc
atcgggctgctggaacagcacttcggccgtctcgtcgactacgacttcaccgccgcgatg
gaggacgaactcgaccagatcgcgtcgggcaccgagcagcggaccaactggctcaacaac
ttctacttcggtggcgagcacggtgccgacggctcgatcgcccgttcgggtggtcttaag
aagctcgtcggcggcaacctcgaggacatcgacgcccgagaagtcaactccatcaagctc
ttcgacgacgacgaaggccgcgcggtcaacgttcgcgtgggccgcaacggaccgtacctc
gagcgcatgatcctcggcgaggacggcgaaccgacaccgcagcgcgccaacctcaaggac
gaactcactcccgacgagttgaccctcgagctggccgagaagctgttctcgacgccgcag
gagggccgttcgctcggcgtcgatccggagtccgggcacgaaatcgtcgccaaggacggc
agattcgggccgtacgtcaccgagatcctgccgcctccgccggaggagccagacgacggc
gcaccggcgaagaagggcaagaagcccgtcggccccaagccgcgcaccggatcgctgctg
cgctcgatggacatcgagaccgtcacgctggaggacgcgctcaagctgctgtccctgccg
cgcgtcgtcggcatcgacccggcgaccaacgaggagatcaccgcgcagaacggccggtac
ggcccatacctgaagcgcggcactgattctcgctcgctggtgaacgaagagcagatgttc
accatcacgctcgacgaggcgctcaagatctacgcagagcccaagcggcgcggcaggcag
ggggcggcgacgccgccgctgcgcgagctgggcaaggacccggtgtccgagcagccgatg
gtgatcaaggacggccggttcggtccgtacgtcaccgacggcgagaccaatgcgagcctg
cgcaagggcgacgacgtcatgtccatcaccgatgcccgggcctcggagctgctggccgat
cgtcgtgcccgcgggccggtgaagaagaaggccgccgcgaagaaggcaccggccaagaag
gctgcgaagaagacgcctgcgaagaaggccccggccaagaaggccgtcaagaaggcttag
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