Mycolicibacterium arabiense: MARA_51570
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Entry
MARA_51570 CDS
T07049
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
marz
Mycolicibacterium arabiense
Pathway
marz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
marz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MARA_51570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marz03400
]
MARA_51570
Enzymes [BR:
marz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MARA_51570
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MARA_51570
DNA repair and recombination proteins [BR:
marz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MARA_51570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Ribosomal_S13
NFACT_N
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
BBY51689
UniProt:
A0A7I7S5W2
LinkDB
All DBs
Position
4891549..4892412
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEVEALADHLRRHATGLTIGRIDVAALSVLKTFDPPPTALHGLQVTGANRWGKFLG
LEVGDLHLITHLSRAGWLRWSDKLSPLPLKPGKGPIALRVHLGIPGEAPGFDLTEAGTQK
RLAVYLVDDPAKVPGIAALGPDALSLNREALCEVLKGNSGRIKTVMTDQKVIAGIGNAYS
DEILHVARLSPFATAGKLTDPQLDALHDAMITVLTDAVTRSVGQQAATLKGEKRSGMRVH
ARTGLPCPVCGDTVREVSFVDKSFQYCATCQTGGKVLADRRMSKLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaggtagaggcgctggccgaccatctgcggcgtcacgccaccggc
ttgaccataggtcgcatcgacgtcgccgccctgtcggtgctcaagacgttcgacccgccg
cccaccgcgctgcacggccttcaggtcaccggcgcgaaccgctggggcaagttcctcggc
ctcgaggtgggcgacctgcacctcatcacccacctgtcgcgggccggatggctgcggtgg
tccgacaagctctcgccgctaccgctcaagccgggcaagggtccgatcgcgttgcgcgtg
cacctcggaatacccggcgaggcacccggtttcgacctcaccgaggcaggcacccagaaa
cggctggcggtgtacctcgtcgacgacccggccaaggtgcccggcatcgccgcgctcgga
cccgacgccctgtcgttgaaccgcgaagcgctctgcgaggtgctcaagggcaacagcggg
cggatcaagaccgtcatgaccgaccagaaggtgatcgcgggcatcggcaacgcctacagc
gacgagatcctgcacgtcgcccggctctcgccgttcgcgacggcgggcaagctcaccgac
ccgcaactcgacgcactgcacgacgcgatgatcaccgtgctcaccgacgcggtgacgcgg
tccgtcggtcagcaggcggccacgctcaagggtgagaagcgcagcggcatgcgggtgcac
gcccgcaccgggctgccgtgtccggtgtgcggggacaccgtgcgcgaggtgtcgttcgtc
gacaagtcgttccagtactgcgcgacgtgtcagaccggcggcaaggtgctcgccgaccgg
cggatgtccaagctgctcaagtga
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