Mycolicibacterium arabiense: MARA_55770
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Entry
MARA_55770 CDS
T07049
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
marz
Mycolicibacterium arabiense
Pathway
marz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
marz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MARA_55770 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
marz03019
]
MARA_55770 (deaD)
03009 Ribosome biogenesis [BR:
marz03009
]
MARA_55770 (deaD)
Enzymes [BR:
marz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MARA_55770 (deaD)
Messenger RNA biogenesis [BR:
marz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MARA_55770 (deaD)
Ribosome biogenesis [BR:
marz03009
]
Prokaryotic type
rRNA helicases
MARA_55770 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
HEM4
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
BBY52109
UniProt:
A0A7I7S717
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All DBs
Position
5314145..5315821
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AA seq
558 aa
AA seq
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MTSPDSDASSTETTFADLQIHPEVLRAVADVGYETPSPIQAATIPAMLAGSDVVGLAQTG
TGKTAAFAIPILSKIDTNSRITQALVLAPTRELALQVAEAFSRYGAHLRVNVLPVYGGSS
YGPQLAGLKRGAQIVVGTPGRVIDHLDKGSLDLSHLDYLVLDEADEMLQMGFAEDVERIL
EGTPEYKQVALFSATMPPGIRKITSKYLHDPVQVKVESKTATADNITQRYIQVAGPRKMD
ALTRLLEVEPFEAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIAQAVRERTIAQLKDG
SIDILVATDVAARGLDVERISHVLNYDIPHDPESYVHRIGRTGRAGRSGTALLFVSPRER
HLLNSIERVTRQKLVESQLPSVDDVNAQRVEKFRDSITNGLSNPGIDLFRKLIEAYERDH
DVPMADIAAALALQSHDGGEFLMTEPPPEKRRERPDRDDGPPRKRRDTRDDLATYRIAVG
KRHKVMPGAIVGAIANEGGLHRSDFGHIAIRPDYSLVELPRKLSHETLKKLEHTKIQGVP
INLTLDRGPKPYRGNKPK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgcctgattcggatgcctcgagcaccgagaccacctttgccgacctgcagata
caccccgaggtgctgcgggccgtcgccgacgtcggctatgaaacgccgtcgccgatccaa
gccgcaaccattcccgcgatgctggcgggctccgacgtggtcgggctcgcccagaccggg
acgggcaagaccgcagcgttcgcgatcccgatcctgtcgaagatcgacaccaacagccgc
atcacgcaggcgctggtactggccccgacccgcgaactcgccctgcaggtcgcagaggca
ttcagccgctacggcgcccacctgcgggtcaatgtcctgccggtgtacggcggctcctcg
tacggcccgcagctggcaggtctcaagcgcggcgcgcagatcgtggtgggcacgccaggc
cgcgtgatcgaccacctggacaagggcagcctggacctctcgcatctggactacctggtg
ctcgacgaggccgacgagatgctgcagatgggcttcgccgaggacgtcgaacgcatcctc
gagggcaccccggagtacaagcaggtggcgctgttctcggccaccatgcccccgggcatc
cgcaagatcaccagcaagtacctacacgacccggtgcaggtgaaggtcgagtcgaagacc
gcgaccgccgacaacatcacccagcgctacatccaggtcgcgggcccgcggaagatggac
gcgctgacccgcctgctcgaggtcgagccgttcgaggcgatgatcgtcttcgtccgcacc
aagcaggccaccgaagaggtcgccgaaaagctgcgcgcccgcgggttctccgccgcggcc
atcaacggcgacatcgcccaggccgtgcgcgagcggaccatcgcgcagctcaaggacggg
tcgatcgacatcctcgtcgcgaccgacgtcgccgcccgtggcctcgacgtcgagcgcatc
tcgcacgtgctgaactacgacatcccgcacgaccccgagtcctacgtgcaccggatcggc
cgcaccggccgcgccggacgatcgggcaccgcgctgctcttcgtgtcgccgcgggagcgg
cacctgctcaactccatcgagcgggtcacgcggcagaagctcgtcgagtcgcagctgccg
tcggtcgacgacgtcaacgcccagcgcgtggagaagttccgcgactcgatcaccaacggc
ctgagcaacccgggcatcgacctgttccgcaagctgatcgaggcctacgagcgcgatcac
gacgtgccgatggccgacatcgccgcggccctggcgctgcagagccacgacggtggcgag
ttcttgatgaccgaaccgccgccggagaagcgtcgcgagcgtccggatcgcgacgacggc
cccccgcgcaagcggcgcgacactcgcgacgacctcgccacctaccgcatcgcggtcggc
aagcggcacaaggtgatgcctggcgccatcgtcggggcgatcgcgaacgagggcggcctg
catcgcagcgacttcggacacatcgcgatccggccggactactcgctcgtcgagctgccc
aggaagttgtcgcacgagacgctcaagaagctcgagcacaccaagatccagggtgtgccg
atcaacttgacgctcgatcgcggccccaagccttatcgaggcaacaagccgaagtga
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