Mahella australiensis: Mahau_1482
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Entry
Mahau_1482 CDS
T01494
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
mas
Mahella australiensis
Pathway
mas02020
Two-component system
mas02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mas00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Mahau_1482
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Mahau_1482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mas03021
]
Mahau_1482
Transcription machinery [BR:
mas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Mahau_1482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_Crp_2
HTH_23
MarR_2
Sigma70_r4
HTH_3
MarR
HTH_IclR
HTH_24
HTH_11
RepL
HTH_12
HTH_36
CENP-B_N
DUF3868
HTH_6
Crp
Herpes_U30
DUF1191
Motif
Other DBs
NCBI-ProteinID:
AEE96673
UniProt:
F3ZYD1
LinkDB
All DBs
Position
complement(1557906..1559303)
Genome browser
AA seq
465 aa
AA seq
DB search
MKMEVNMDVELKQTQKVIMTPQLQQGLGILQLPAVELNKYLREQAEVNPLLELEDNIDKG
IEESLPDYAIEDPPPDWTEYFTDEDYYDYDDVKAGGDKSSLYYEDIGDDNKSLQQHLLEQ
LVPSNLSETDMRIARYIIESLDDNGYISLSKYEIAESLGIDRQTVSRILSVIQQLDPPGV
GARSLRECLLIQLRQKGLLQDDVQSVILGALRELAENKFAYISKQFGISVQRIQEISEMV
KQLDPKPGRWFFNGNATRYIIPDILVSKKQDGYNITLHPYSMPNLEINQFYKKLLDTDEV
DDAVAGYISQKLEEALWLIKCVEQRKITLQKVASAIVEQQQEFFDNGIKFLKPLTLKDIA
AMVDMHESTVSRAVSGKYMQTPRGMFDMKYFFASGISKSDGGSIAAAAIKEFIQEFIDNE
DSNKPLSDNAIALMLNEKGIKISRRTVAKYREEMQLPSSDKRRRL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggaagtaaatatggatgtagaattaaaacaaacacaaaaggttataatgact
ccccaactccaacagggattggggatattgcaattaccggctgtagaactgaataaatat
ttgcgtgagcaagcagaagtaaatccgttactggaattagaagacaatatagataaaggt
atagaagaatcattgcctgattatgcgatagaagatccgcctccggactggaccgaatat
tttactgatgaggattattatgactatgatgatgttaaagctggtggcgataagtcgagt
ttatattatgaagatataggcgatgacaataaatcattacaacagcatcttttagaacaa
ttggtgccttccaatctgtctgaaaccgacatgcgcatagctaggtatataatagagagc
ttagacgacaacggatatataagcctttcaaaatatgagatcgccgagtcgctcggtata
gacaggcaaacagtatcacggattttatctgtcatacagcaacttgacccgccgggtgtg
ggtgccaggagcttaagagaatgcttgcttatacagcttcgccaaaaagggttattgcaa
gacgatgtgcagagcgttatacttggagcgctgcgcgagttggccgaaaataaatttgcg
tatatatccaaacaatttggtatttcggttcagcgtattcaagagataagcgagatggta
aagcaactggatcccaaaccgggccgctggttttttaatgggaatgcaacgagatacatt
atacctgatatattggtgagcaagaagcaagatggatataatataacgctccatccctat
tcgatgccgaatctggagataaatcagttctataaaaagcttttggatacagatgaagtc
gatgatgctgtagcgggttatatctctcaaaagcttgaagaggccttgtggcttataaag
tgcgtggagcaaaggaaaataaccctgcaaaaagtggcttcagccatcgtagagcagcag
caggaattcttcgataacggcatcaagtttttaaagccacttacattaaaagatatagct
gccatggtggacatgcacgaatctactgttagccgtgctgtaagtggaaagtatatgcag
acgccaagaggtatgttcgatatgaagtatttttttgcgagcggcataagcaaatcagac
ggtggcagtatagcggccgcggccataaaggaattcatacaagaatttatagataatgaa
gattctaataagccgttaagcgataatgccatagcccttatgttgaatgaaaagggtata
aagatttcgcgccgtacggtagcaaagtacagagaggaaatgcaattaccatcatccgat
aaaagaagaaggctttaa
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