Mahella australiensis: Mahau_2011
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Entry
Mahau_2011 CDS
T01494
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mas
Mahella australiensis
Pathway
mas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mahau_2011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mas03019
]
Mahau_2011
03400 DNA repair and recombination proteins [BR:
mas03400
]
Mahau_2011
Enzymes [BR:
mas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mahau_2011
Messenger RNA biogenesis [BR:
mas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mahau_2011
DNA repair and recombination proteins [BR:
mas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mahau_2011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AEE97187
UniProt:
F4A248
LinkDB
All DBs
Position
complement(2140608..2142083)
Genome browser
AA seq
491 aa
AA seq
DB search
MAVETDNLLIYLKRYFGYDAFIGQQEAVIRSVLSGNDTLAVMPTGSGKSLCYQLPALILP
GTAIVVSPLIALMKDQVDFLRHNGIPAAFINSTLTIAQQQECMRRLQKGRYKLIYVAPER
FRSQSFLDGLKEVHISLFAVDEAHCISQWGHDFRPDYLRLAQAIEYTGRPPVIATTATAT
SYVRDDIIQQLKLVRPRCFVTGFERPNLRFIVKAVSSESQREAFILDTIGQLRFPGIIYT
ATRKATEMLATRLNRAGIIAAPYHAGLSDQQRIRVQDDFMQGRLPVILATNAFGMGVDKP
DVGFVLHYNMPASLEAYYQEAGRAGRDGQPACCILLYKPSDKHLQEFMINNNYPNLKAVR
AVYNSLCRSGSDVVTLGIKETAASLSDGISVSAVNVALEALERAGAIKRLPVKGTWQRAY
RLLDRSKSFEYWPVDISAYNKQRRYDMERLESIVNYCKTYTCRRNYILNYFGEKPISSRC
GKCDRCDGIEF
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggccgttgaaaccgacaatctcttaatttacctcaaacgatatttcggttatgatgcg
tttatcggtcagcaggaggccgttatacgctccgtattgagcggcaacgatacattggcg
gtgatgcctaccggcagcggtaaatcgctgtgctatcaactgcctgcattgattttgccg
ggtacggccatagtagtatcgccattgatagcgcttatgaaagaccaggtggatttttta
aggcacaacggtataccggctgcttttataaatagcacgttgacgatagctcaacaacag
gaatgcatgagacgtctgcaaaaggggcgctataagttgatatatgtggcgccggagaga
tttcgcagccagagctttttagatggtttaaaagaagtacatatatcattgtttgcggta
gacgaggcgcattgcatatctcagtgggggcatgattttaggccggattacctgcgactg
gctcaggccatagaatatactggacggccgccggttatagctactaccgccaccgcaacg
tcgtacgtcagggatgatatcatacagcaattaaagcttgtgcgtcctagatgttttgta
acgggatttgaacgtcccaatcttcgttttatagtaaaggcagtatcatctgagagccaa
agagaggcttttattttagatacgataggtcaacttagatttccgggcataatatacaca
gctacgcgaaaggcgaccgaaatgctggctacaaggttgaatcgcgccggcattattgcg
gccccttatcatgccggcctaagcgaccaacagcgcatacgcgtgcaggatgatttcatg
caggggcgtttgcctgtcatattggccaccaatgccttcggcatgggcgtggacaagccc
gatgtgggttttgtgctgcactataatatgccagccagtctggaagcctattatcaggaa
gctggcagagcgggacgggatggacaaccagcatgctgcatattgctttataaaccgtcg
gataaacatttacaggagtttatgataaataataattatccaaatctaaaggctgtacgg
gctgtctacaattcactttgtcgttcaggcagtgatgttgtaacactagggataaaagaa
acagcagcgtcgttgtccgacggcatatcggtctcggcagtaaatgtagctttggaggcg
ttggaacgcgccggagctataaagcgtttgccggttaaaggtacttggcaaagggcgtac
aggttgcttgacagaagcaaatcctttgaatattggcctgtggacatatcggcgtataac
aagcaacgccgatatgatatggaacgattggaaagcatagtgaactactgcaaaacatac
acttgtcgtcggaattacatattgaattactttggagagaaaccgatttcttctagatgc
ggcaaatgcgatcgttgcgatggcattgagttttga
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