Massilia sp. B-10: LP420_00020
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Entry
LP420_00020 CDS
T10663
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
masb Massilia sp. B-10
Brite
KEGG Orthology (KO) [BR:
masb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
masb03032
]
LP420_00020
03036 Chromosome and associated proteins [BR:
masb03036
]
LP420_00020
03400 DNA repair and recombination proteins [BR:
masb03400
]
LP420_00020
DNA replication proteins [BR:
masb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LP420_00020
Chromosome and associated proteins [BR:
masb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LP420_00020
DNA repair and recombination proteins [BR:
masb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LP420_00020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
UUZ49002
LinkDB
All DBs
Position
complement(340..603)
Genome browser
AA seq
87 aa
AA seq
DB search
MNKTELIESIAKSADISKASATRALDAVLEAVTTSLRNNDSVTLVGFGTFSVGGARARAS
IHAPRKPSRSPQRKFPNLKLAKRSKMQ
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaaactgaattaatcgagtctatcgccaagtcggcggacatttccaaagcatcg
gccacgcgcgccctggacgccgtgctcgaggccgtcacgaccagcctgcgcaacaacgac
agcgtgaccctggtcggctttggcaccttctcggtggggggcgcgcgcgcacgggcgtca
atccacgcaccaaggaaaccatcaagatcgccgcagcgaaagttcccaaatttaaagctg
gcaaagcgctcaaagatgcagtaa
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