Massilia sp. B-10: LP420_10315
Help
Entry
LP420_10315 CDS
T10663
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
masb Massilia sp. B-10
Brite
KEGG Orthology (KO) [BR:
masb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
masb03016
]
LP420_10315 (truB)
Enzymes [BR:
masb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LP420_10315 (truB)
Transfer RNA biogenesis [BR:
masb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LP420_10315 (truB)
Prokaryotic type
LP420_10315 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TcfC
ALTTAQ_rpt
Motif
Other DBs
NCBI-ProteinID:
UUZ50296
LinkDB
All DBs
Position
complement(1376953..1377876)
Genome browser
AA seq
307 aa
AA seq
DB search
MKPTHPQKVRDLVDGVLLLDKPVGLSSNDALIKTKRYMNAKKAGHTGTLDPFATGLLPLC
FGEATKFSQDLLEADKTYETTVHLGITTNTGDTEGETIATHEVNVTREQIEAVLPQFRGP
IMQVPPMYSALKRDGKAYYEYAREGITLEREARPVTILKLDFISYDAPFLKLSVTCSKGT
YIRVLGEDIGHALGCGAHLNALRRTQVGALTTEGMVTLEQIAAHPQPVALLAPVDALLST
FPAVELTPELAKRFLQGQRLALGKEALTLPPELGRVRVYHDGKLLGTANLQEYQILAPER
LIATAHG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaacccacccccaaaaagtccgcgacctggtcgacggcgtgctcctgctcgac
aagccggtcggcctgtcctcgaacgacgccctgatcaagaccaagcgctacatgaacgcg
aagaaagcgggccacaccggcacgctcgatcccttcgcgacgggtttgctgccattgtgc
ttcggcgaagcgaccaagttctcgcaggacttgctcgaagccgacaagacctacgaaacc
acggtccacctgggcatcaccaccaacaccggcgacaccgaaggcgagaccatcgccacc
cacgaggtgaacgtcacgcgcgaacagatcgaagccgtgctgccccagttccgcggcccc
atcatgcaagtgccgccgatgtactcggccttgaagcgcgacggcaaagcctattacgaa
tacgcgcgcgaaggcatcacgctcgagcgcgaagcgcgcccggtcacgatcctcaagctc
gacttcatttcctacgacgcgcctttcctcaagctgtcggtcacctgcagcaagggcacc
tacatccgcgtgctgggtgaagacatcggccacgcgctcggttgcggcgcccacctgaac
gcactgcgccgcacccaggtcggcgcactgacgaccgaaggcatggtcacgctggaacag
atcgccgcccatccgcagccggtcgcgctgctggcgccggtcgacgcgctgctgtcgacg
ttcccggccgtggaactgacgcccgagctggccaagcgcttcctccagggccagcgcctc
gcgctcggtaaggaagcgctcacactgccgccggaactggggcgcgtgcgcgtctatcac
gacggcaaactgctgggcaccgccaacttgcaggaataccagatcctggcgcccgagcgc
ctgatcgccaccgcccacggctga
DBGET
integrated database retrieval system
