Massilia sp. B-10: LP420_33765
Help
Entry
LP420_33765 CDS
T10663
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
masb Massilia sp. B-10
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA
HTH_50
AAA_5
IstB_IS21
AAA_7
Mg_chelatase
HTH_30
HTH_29
HTH_28
HTH_23
MCM
Parvo_NS1
HTH_Tnp_ISL3
HTH_AsnC-type
HTH_22
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
UUZ47968
LinkDB
All DBs
Position
complement(4737549..4738934)
Genome browser
AA seq
461 aa
AA seq
DB search
MESRKQRILIVDDDAAVQVSLALLLKQSGYEALCSDGPDAALAMLAAEPVSLVLQDMNFS
LQTSGEEGMDLLARIKERHPDTPVLLMTAWGSIALAVRGVKVSAANFFTKPWNNAQLVEL
IASTLELSASLSPQRLNRQALDRQFDFAAIVGAHPKLLRVLATIGQVARTKAPVLILGES
GTGKELIADAIHKNSPRVYCMPVKINMGAITPSLFESEMFGHVRGAFTDAKADRKGHVAC
AHESTLFLDEIGELNRGDQVKLLRVLQDQSYQPVGASRSEQADIRVVSATNQELAELVAS
GDFREDLFYRLNLITIRLPPLRERRTDIPLLAKHIIEGVAVKYGLEPVTLTPQALDWLAA
QPWPGNIRQLKQTLERTVLLAGKSLLTQADFVGAEHNDDSSGQQRLGVDGMTLEQVERRM
IEQALDQHRGNISRVAQALGLSRTALYRRLERHGLGGGAEE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggaatcacgcaagcaacgcattttgattgtcgacgacgatgccgccgtccaggtctcg
ctggccctgctgctcaagcagtcgggctacgaggcgctctgctccgacgggccggacgcc
gcgctggccatgttggcggccgagccggtcagcctggtgctgcaggacatgaatttctcg
ctgcaaaccagcggcgaggaaggcatggacttgctggccaggatcaaggaacgccacccc
gatacgccggtcctgctgatgacggcctggggctcgatcgcgctggcggtgcgcggcgtc
aaagtaagcgccgccaatttcttcaccaagccgtggaacaatgcgcagctggtcgaactg
atcgccagcacgctggaactgtcggcctcgctgtcgccgcagcgcctgaaccgccaggcg
ctcgaccgtcagttcgatttcgccgccatcgtcggcgcccatcccaagctgctgcgcgta
ctggccaccattggccaggtcgcccgcaccaaggcgccggtgctgatcctcggggaaagc
gggaccggcaaggaactcattgccgacgcgattcacaagaacagtccgcgcgtctactgc
atgccggtcaagatcaatatgggcgcgatcacgccctcgttgttcgagagcgaaatgttc
ggccatgtgcgcggcgcctttaccgatgccaaggccgaccgcaagggccacgtcgcctgc
gcccacgagagcaccctcttcctcgacgagatcggtgaactgaaccgcggcgaccaggtc
aaactgctgcgtgtactgcaagaccagagctaccagcccgtgggcgccagccgcagcgag
caggcagacattcgcgtcgtctccgccaccaaccaggagctggcagaactggtcgcgtcc
ggcgacttccgcgaggacctgttttaccgcctgaacctgatcacgatccggctcccgccc
ctgcgcgagcgccgtaccgatatcccgctgctggccaagcacatcatcgaaggcgtggcc
gtcaagtacgggctggagccggtcacgctcacgccccaggccctggactggctggccgcc
cagccctggccgggcaacatccgccagctcaagcagacactcgaacgtaccgtcctgctg
gcgggcaagagtctgctgacgcaggccgattttgtcggcgccgagcacaacgacgacagc
agcggccagcagcgcctcggcgtggacggcatgacgctcgagcaagtggaacggcgcatg
atcgagcaggcgctcgaccagcaccgcggcaatatttcgcgcgtggcgcaggcgctcggt
ctgtcgcgcacggccctttaccgtcgcctggaacgccatggcctcggtggcggggccgaa
gaatga
DBGET
integrated database retrieval system
