Massilia sp. H-1: LP419_09735
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Entry
LP419_09735 CDS
T10679
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mash Massilia sp. H-1
Brite
KEGG Orthology (KO) [BR:
mash00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mash03016
]
LP419_09735 (truB)
Enzymes [BR:
mash01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LP419_09735 (truB)
Transfer RNA biogenesis [BR:
mash03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LP419_09735 (truB)
Prokaryotic type
LP419_09735 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
NMD3_OB
Motif
Other DBs
NCBI-ProteinID:
UUZ55773
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All DBs
Position
complement(1378172..1378729)
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AA seq
185 aa
AA seq
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MKPTHPKKVRDLVDGVLLLDKPVGLSSNDALIKTKRYMNAKKAGHTGTLDPFATGLLPLC
FGEATKFSQDLLEADKTYETTVHLGITTNTGDTEGETIATHEVNVTREQIEAVLPQFRGP
IMQVPPMYSALKRDGKAYYEYARRHHARARSAPGHDPQARLHFLRRAFPQAVGHLQQGHL
HPRAG
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaacccaccccaaaaaagtccgcgacctggtcgacggcgtgctcctgctcgac
aagccggtcggcctgtcctcgaacgacgccctgatcaagaccaagcgctacatgaacgcg
aagaaagcgggccacaccggcacgctcgatcccttcgcgacgggtttgctgccattgtgc
ttcggcgaagcgaccaagttctcgcaggacttgctcgaagccgacaagacctacgaaacc
acggtccacctgggcatcaccaccaacaccggcgacaccgaaggcgagaccatcgccacc
cacgaggtgaacgtcacgcgcgaacagatcgaagccgtgctgccccagttccgcggcccc
atcatgcaagtgccgccgatgtactcggccttgaagcgcgacggcaaagcctattacgaa
tacgcgcgaaggcatcacgctcgagcgcgaagcgcgcccggtcacgatcctcaagctcga
cttcatttcctacgacgcgcctttcctcaagctgtcggtcacctgcagcaagggcaccta
catccgcgtgctgggtga
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