Myxocyprinus asiaticus (Chinese sucker): 127409787
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Entry
127409787 CDS
T08782
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha b
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04137
Mitophagy - animal
masi04140
Autophagy - animal
masi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127409787
04137 Mitophagy - animal
127409787
04148 Efferocytosis
127409787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
masi03000
]
127409787
Transcription factors [BR:
masi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
127409787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Rbsn
Utp21
Motif
Other DBs
NCBI-GeneID:
127409787
NCBI-ProteinID:
XP_051500567
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Position
19:complement(20699523..20716389)
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AA seq
779 aa
AA seq
DB search
MDTGVVTEKKRVSSERRKEKSRDAARSRRGKESEVFYELAHQLPLPHNVSSHLDKASIMR
LTISYLRMRNLLSSDEEEKENEVESQLNSFYLKALEGFLMVLSEDGDMVYLSENVSKSMG
LTQFDLTGHSIFEFSHPCDHEELREMLVHRMGSKKNKEMQNTERSFFLRMKCTLTSRGRT
VNIKSATWKVLHCTGHVRVQERSEESGDCGFKEPPQAYLVLICEPIPHPSNIEVPLDSKT
FLSRHTLDMKFSYCDERITELMGYEPDDLLNKSVYEYYHALDSDHLTKTHNNLFAKGQAT
TGQYRMLAKKGGYVWVETQATVIYNPKNSQPQCIVCVNYVLSGIVNGDIVLSLQQTVTEP
QVMEKESQEMEEASEVDVLKLFRPEGLKHSMGSSSELYDMLKDKSEDLDRLAPAIGDTII
SLDFNNSDSDVQLLKEVPLYNDVMLPSSSEKLPMTLSCLTTSESIPPLTKLETAEDFPFS
SDSQRVPDSNTPSTPGLGSSGPNCPMDYCFQVDSDISSEFKLDLVEKLFAIDTEAKTPFT
TQDMEDLDLEMLAPYIPMDDDFQLRIPSPLDPLPSGPHSVLAMSSLFQHLPTPASPDSAS
NSAVKQEPSSRSPSPLHLLQEVCSAPVSPFSGSREASPARSPTPQAGKQLNNRMPMGDRE
LSPKILAIQNAQRKRKLEEVTSLSEAVGLGALLQRVDSAIESGKRAKVLELKGSSVLGGN
KTILILPSDVASRLLSSSLESSDGLPRLTRYDCEVNAPVQDRHHLLQGEELLRALDQVN
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggatactggagttgtcactgaaaagaaaagggtgagctcggagcgcaggaaggagaag
tccagggatgcggcgcgaagtcgcaggggaaaggagtctgaggtgttctacgagctagca
caccagctccccctgccacacaatgtcagctcccacctggacaaagcctcgatcatgagg
ctgaccatcagctacctgcgcatgaggaacctgctcagctctgatgaagaagagaaggag
aatgaggtggagagtcagcttaatagcttctacctgaaggccctggagggtttcctcatg
gtcctctctgaggatggagacatggtttatctctctgagaatgtcagcaagagcatgggc
ctcacacagtttgatctgaccggtcacagcatctttgaattttcacacccgtgtgatcat
gaggagttgagagaaatgctagtccacaggatgggatccaaaaaaaacaaggaaatgcaa
aacacagagcgaagcttcttcctgcgtatgaagtgcacactcactagcagagggcgcact
gtcaatatcaagtctgctacatggaaggtgctccactgcacaggccatgtccgtgtgcaa
gagcgcagtgaggaatctggagactgtggctttaaagaaccccctcaggcctaccttgtg
cttatctgtgagcccattcctcatccctcaaacatcgaggttcctctggacagcaagacc
ttcctcagccgccacactctggacatgaagttctcgtactgtgatgaaaggatcacagaa
ttaatgggatatgagccagatgatctgctaaacaagtcagtgtatgaatactatcacgcc
cttgattcagaccatctaaccaagacacataacaacttgtttgcaaagggccaggctacc
acaggccagtaccgcatgctggctaagaaaggtggttatgtgtgggtggaaactcaggcc
accgtcatctacaaccccaagaattcccagccacagtgcattgtgtgtgtcaactatgtt
ctcagtggcattgtgaatggggacattgtcctttctctgcagcagaccgtgacagagcca
caagttatggagaaagagagccaggagatggaagaggcatctgaggtggatgtgctcaaa
ctcttcaggccggaaggcctcaagcattcaatggggagctcttcagaactgtatgatatg
ttaaaggacaaatctgaggacctcgatcgattggcacctgcaattggagacaccatcatc
tctcttgacttcaacaactcagattctgatgtgcagctgctgaaggaggtgcctctctac
aatgatgtcatgttgccctccagcagtgagaagctgcctatgactctgtcttgtctgacc
accagcgagtccatcccaccactgaccaaattggagacagcagaggacttccctttcagc
tcagactcacagcgggttcccgactctaacacaccttctacacctggacttggctcctca
gggcccaactgtcctatggattactgtttccaagtggactcagatatcagttctgaattt
aaactggacctggttgagaaactgtttgctattgatacagaggcaaagaccccttttacc
acacaggacatggaggatcttgatctggagatgctagctccatacatcccaatggatgat
gacttccagctgcgcatcccctctcccctggatccactcccgtctggccctcactctgtg
ttggccatgagctccctgttccagcatttgcccacccctgcatctccagattctgcttcc
aacagtgctgtgaagcaggagccatcgtcacggtcaccttcgcccctgcacctgctgcag
gaggtgtgcagtgctccggtctcacccttcagtggcagcagggaggcttccccagcacgt
tcccccaccccacaggcaggcaaacagctcaacaacagaatgcctatgggggatcgagag
ctgtctccaaagattttagccattcagaatgcccaacggaagaggaagctggaggaggtg
acatcactttctgaagccgttggactgggtgctttgcttcagagagtggacagtgctatt
gagtctggaaagagggccaaggttttggagcttaaaggatcaagtgtgcttgggggaaac
aaaactattctcatacttccctccgatgtggcaagtcgtctgttgtccagttctctagag
agcagtgatgggctgcctcggctaacacgctacgactgcgaggtcaatgctccagttcaa
gaccgccatcatctgctccagggagaggagcttctgcgtgctctggaccaagtcaactga
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