Myxocyprinus asiaticus (Chinese sucker): 127409940
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Entry
127409940 CDS
T08782
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127409940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127409940
03036 Chromosome and associated proteins [BR:
masi03036
]
127409940
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127409940
Coactivators
SAGA/TFTC/STAGA complex
127409940
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
127409940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Staph_reg_Sar_Rot
DUF3106
Motif
Other DBs
NCBI-GeneID:
127409940
NCBI-ProteinID:
XP_051500895
LinkDB
All DBs
Position
19:19066777..19098966
Genome browser
AA seq
816 aa
AA seq
DB search
MSETTNSDKNNNESIEKTNEARIKAVTQSNDTHANTEECEVTLQTTSGKQTETSVSSSNA
TKASENNKSDSASLKDEREQTKAKTGADQSSKSETHPPLTSVPVRSSAPASSEPAPKIIT
GTAQIRSTTPVVVGARVVTATTSSVQGPGGASLAQVPQAGRGSVSSTAINQPRVTTLTPA
KGTVVRISTPSQSVPMTRAPQTMLPANFQVPQGMVLIRSDSGQLMLVSQQALAQAQAQGM
LPKPANANASAIVRTASSQATGTATPVIRVSLPPSSASATTSIKHNPTSGAAHSVTGTTV
LKPAYTTGTTIIKPANVVATAVRKPTSTMGTVIKASQITPNSSTAGTLNQGTNSVSTTTV
INTSAVKETLENVKKCKNFLVTLMKLASSGTRSANMAQNVRALVKGLLDGKLEAEEFTEK
LYMELKSSPQPYLVPFLKRSLPAVRQLTPNSQLFIQQCDQLKPSDSASAKTANQKPSISI
SSTIKPNQPTRPAQLVIQQPKGVIVEQPVISLSAQNNSQPKQLVIQTSTHSTVPTSAVVR
QSILQVSKTHFSQPPLTAHAHGFKDSTSGSFRDDDDINDVASMAGVNLSEENARILASGS
ELVGSVIRSCQEEPFLFPSALQTQVLHIGGSLGITEVCPDVFELLSLATKERLGDLLEKL
TAVAQHRQISYRDDWRYSQTNDTRSQLKFLEQLDRLEKQRREEDEREALLRIARSRSNSE
DPEQQRLRQRAKEMQQLELAQMEHRDANLAALAALGPRKRKALEASGPGANQLLGPYGQL
TTQRAPIRVTMRDLTFCMEQDPTLRHSLKLYSGFLR
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaacaactaactcggataagaacaataatgagtcgattgagaaaacaaatgaa
gcgcgaataaaagcagttacgcagagcaatgacacgcacgcaaacactgaggagtgcgaa
gtcactctacaaaccacatcaggcaagcaaacagagacttcagtctccagctctaatgcc
accaaagcttctgaaaataacaagtcggattcagcgtccctcaaagacgagcgcgagcag
acaaaagcaaagacgggtgctgatcaatcttcaaaatccgaaacacatccccctctaact
tcagttccggtaaggtccagtgcaccagcctcatctgaacctgctccaaagatcataaca
ggaactgcacaaatcagatccaccacaccagtggtcgtaggtgccagagtagtgacggct
acgacctccagtgtgcagggaccaggaggtgccagcttggcacaggttcctcaggctgga
agaggttctgtaagctctacagctataaaccagccccgggtcaccaccttgaccccagcc
aaaggtactgtcgtgaggatttccaccccatcacaaagtgtaccaatgacacgtgcccct
caaactatgctgcctgccaactttcaagtccctcaaggaatggtgttaatccgcagtgac
agtgggcagttgatgttggtatctcagcaggctctggcccaagcacaggctcagggaatg
ctgccaaaaccagctaatgccaatgcctctgctatagttagaaccgcatcatcccaggca
actggaactgctacaccagtcatcagagtttctctccctccttctagtgcatcagccact
accagtattaaacataaccctacatcaggggctgcacattctgtgacaggaactactgtt
ctcaaaccagcttatacaacaggaacgaccatcattaaacccgccaatgttgtagcgact
gcagtcagaaagcccacctctaccatgggcactgttatcaaagccagtcaaattactcca
aacagcagcacagcggggacccttaaccaggggactaattctgtcagcacaactactgta
attaatacctctgctgtaaaggaaaccttggagaacgtgaagaagtgtaagaacttcctg
gtcaccttgatgaagctagcatccagtggcactcgctcagccaacatggcgcagaatgtc
cgagctcttgtcaaaggcctactggatggtaaattagaggcagaagagtttactgaaaaa
ctctacatggagctcaaatcttcccctcagccatatctagtgccctttcttaagagaagc
ctaccagctgtacgtcagctcaccccaaactcgcagctcttcattcaacaatgtgaccaa
cttaagccatcagattcagcatcagccaagactgcaaaccaaaagcccagcatctccatc
agctccaccatcaaacccaaccagccaaccagacctgctcagctggtgatccagcaacct
aaaggagtaatcgtcgaacagcctgtaatatcattatcagcccagaacaattctcaaccc
aaacagttggtcattcaaaccagcactcattcaacagtccccacaagtgctgttgtgcgg
cagtccatccttcaggtgtctaaaacacacttttctcagccaccccttacagcacatgca
cacggcttcaaggacagcacctcgggctctttccgagatgacgatgacattaatgatgtg
gcctccatggcaggagtgaatctgagtgaggagaacgctcgtatcttggcctctggctct
gagcttgtgggatcagtgatacgctcctgtcaagaggagccctttttattcccatcagcc
ctccagacacaagtgctccacatcggtggttctctgggtattacagaagtgtgtcctgat
gtatttgaattgctctctctggcaacaaaagagagacttggagacctgctggagaagcta
accgctgtagcacaacatcgccaaatctcctatagggatgattggcgctacagtcagacc
aatgacacacgctctcagctgaagttccttgagcaactggacagactggagaaacagagg
agagaggaagacgagagagaagcactactccgcatcgcccggagtcgctctaacagtgaa
gacccagagcaacaacgtctcagacagagagccaaagagatgcagcagttggagttggca
cagatggagcaccgagatgcaaatttggcagcgctggcagccttgggaccccgtaagagg
aaagctctggaggcttccggcccaggggccaaccagttgttaggtccatacgggcagctt
acaactcaaagagcaccaattcgagtcactatgagagatctgactttctgcatggagcaa
gaccccacgctcagacactcactcaagctatatagtggatttctacgctag
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