Myxocyprinus asiaticus (Chinese sucker): 127410354
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Entry
127410354 CDS
T08782
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
masi03041
]
127410354
03016 Transfer RNA biogenesis [BR:
masi03016
]
127410354
Enzymes [BR:
masi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127410354
Spliceosome [BR:
masi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127410354
Transfer RNA biogenesis [BR:
masi03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
127410354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
127410354
NCBI-ProteinID:
XP_051501529
LinkDB
All DBs
Position
19:32779777..32788082
Genome browser
AA seq
739 aa
AA seq
DB search
MAAFGEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGRTAVKTGGAVFNKWQMNPYDRSPAFAIGPDGLCCQSREFKEWH
GCRSTKGVTKGKYYYEVTCHDQGLCRVGWSTSQASLDLGTDKYGFGFGGTGKKSNNKQFD
SYGEEFTMHDTIGCYLDLDKGHMSFSKNGNDLGLAFEILQQIKNQPFFASCVLKNAELKF
NFGDEPFKNQPKDGYVALNQAPDGHVVKSTQTGSAKVSQVKSTSNAPRALIIEPSKELAE
QTLNNVNQFKKYVDNPKLRDLLIIGGVAAKEQLSILESGVDIVVGTPGRLDDLISTGKLD
LSQVRFLVLDECDGLLTAGYTDFIMRVYNQIPQVTSDGKRLQVIVCSATLHSFEVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKTDRFWEKLKSHIRTDEVHAKDNTRPGANT
PEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEEYFIKQGGGPDKKGHQLS
CVCLHGDRKPNERKYNLERFKKQEVNFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH
RIGRVGRADRMGLAISLVAMEKEKVWYHVCNSRGKSCNNTRLKENGGCTIWYNEKELLSE
IEEHLKCTITQCEPDIKVPVDEFDGKVTYGQRRAAGGGLYKGHVDILAPTVQELANLERE
AQTSFLHLGYLPNQLFKAF
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgttcggtgaaatgggagtgatgcctgaaattgcgcaagcagtggaagaaatg
gattggctgttgccaacagacattcaggccgagtccatcccactaattctgggtggcgga
gacgtgctcatggctgctgagactgggagtggtaaaactggagccttcagtattccagta
atccaaattgtctatgagacccttaaagaccagcaggaggggaagaagggacgcacagca
gtgaagacgggaggagcggttttcaataaatggcagatgaacccctatgatagaagtcca
gcatttgctattggtccagatggcctgtgttgtcaaagcagagagttcaaagagtggcat
ggctgtcgttccaccaaaggtgtcacaaaagggaagtattattatgaagttacctgtcat
gatcaagggctgtgcagggtgggctggtccaccagccaggcatcactggacttggggacg
gataaatatggatttggctttggagggactggaaagaaatctaacaataagcagtttgat
agttatggagaggagttcactatgcacgacaccattggatgctacctagatctggacaaa
ggccatatgtcattctccaaaaatggtaatgatctgggtctggcttttgagatccttcag
cagattaaaaaccagcccttctttgcttcctgtgtgctgaagaatgccgaactgaaattc
aactttggtgacgaacctttcaaaaaccaacccaaagatggctatgtggctctgaaccag
gcaccagatggacatgtggtcaaatccacccagacaggcagtgctaaagtgagtcaggtc
aaatccacttctaacgcccccagagctctcatcattgagccatctaaagagctggctgaa
cagaccctcaacaatgtcaatcagttcaagaaatacgttgataaccccaaattgagggat
cttctgatcatcggtggagtggctgctaaagaacagctatccattttagaaagcggggtt
gatattgtagttggaacaccaggcagactggatgatctcatatccacaggaaagctggac
ctatcccaagtccgcttcctggttctggatgagtgtgatgggctcctcacagctgggtac
actgacttcatcatgagggtgtacaaccagatccctcaagtcacctcagatggcaagaga
ctacaggtgatcgtttgctctgccacgctgcactcatttgaagtgaagaagctctctgaa
aagatcatgcatttccccacatgggtggatctgaagggtgaagactctgtgccagaaacc
gtccatcacgtggtggtgccggtcaaccctaaaactgacaggttttgggagaaactgaaa
agccacattaggactgatgaagttcatgccaaggacaacacacgacctggagccaacacc
ccagagatgtggtcagaagctattaaaatcctaaagggagagtacacagtgagagccatt
aaggagcataagatggatcaggccatcatcttctgcaggacaaagattgactgtgacaat
atggaggagtacttcatcaagcaaggaggaggtccagacaagaaaggacaccagctctct
tgtgtttgtcttcatggtgacaggaaaccaaatgagcgcaaatacaacttggagagattc
aagaaacaggaagtgaactttcttatttgcacggatgtagctgccagaggaattgatatc
catggtgttccgtacgtgataaatgtgactctaccagatgagaagcagaactacgtacat
cgcattggaagagttggcagagcagacaggatgggtctggctatatcactggttgcgatg
gagaaagaaaaggtgtggtaccatgtttgtaacagcagaggaaaaagctgcaataacacc
agacttaaagagaacggaggctgcacaatttggtacaatgagaaagagcttttgtcagaa
atagaggaacatctaaaatgcaccattactcagtgtgaacctgacatcaaagtacctgtt
gatgaatttgatggcaaagtgacttatgggcagcgcagggctgcagggggtggtctgtat
aagggtcatgtggatatactggccccaactgtacaggaactggccaacctggaaagagag
gcacaaacgtccttccttcatctcggctatctacccaaccagctcttcaaagcgttctga
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