Myxocyprinus asiaticus (Chinese sucker): 127410860
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Entry
127410860 CDS
T08782
Name
(RefSeq) polyadenylate-binding protein 4-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03015
mRNA surveillance pathway
masi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127410860
09123 Folding, sorting and degradation
03018 RNA degradation
127410860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127410860
03041 Spliceosome [BR:
masi03041
]
127410860
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127410860
mRNA cycle factors
Stress granule specific factors
127410860
Spliceosome [BR:
masi03041
]
Complex C
Other components
Complex C specific factors
127410860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RRM_10
RRM_5
RRM_occluded
RBD_RDR6
RRM_3
OB_RNB
POP1_C
Motif
Other DBs
NCBI-GeneID:
127410860
NCBI-ProteinID:
XP_051502030
LinkDB
All DBs
Position
20:complement(18389569..18406744)
Genome browser
AA seq
637 aa
AA seq
DB search
MNAATAGSYPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNF
QQPADAERALDTMNFDVVKGKPVRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTF
SAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER
EAEMGAKAKEFTNVYIKNFGEDMDNERLKELFDKYGKILSVKVMTDPTGKSRGFGFVSYE
KHEDAYKAVEEMNGMELNSKTMFVGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIK
NLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVG
SKPLYVALAQRKEERKAHLTNQYMQRIAGMRAMPANAIINQFQPASGYFMPAVPQAQNRT
TYYAPNQLTQMRPNPRWQQQGGRGQGGFQGMPSSLRQPGPRANIRHLAPSASTQGPRGIP
TGAQRVGGNGQPMGPRTAMGVTNPRAMPPYKYATTIRNTQPQVVQPITLQQAQPAVHVQG
QDPLTASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESHE
SLRSKVEEAVAVLQAHQAKKDATQKVGVNAATAAATS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagcgaccgcggggagttatccgatggcttctctctatgtgggcgacctgcac
cctgatatcacggaggctatgctgtatgagaaattcagtccggccggcccggtgctgtcc
atccgcgtgtgtcgggacatgatcacccggcgctcgctgggctatgcctacgtcaatttc
cagcagcctgcggacgcggagagagcgttggacacaatgaacttcgatgtggtcaaagga
aagccagtcagaatcatgtggtcacagagagatccgtcactcaggaaatctggagttgga
aatgtcttcatcaaaaatctggacaagtccatcgacaacaaggccctttatgacaccttc
tctgctttcggaaacatcctgtcctgcaaggtggtgtgtgatgagaatggatctaagggc
tacgcctttgtgcatttcgagactcaggacgcagctgaccgcgccattgagaagatgaat
ggcatgctgctgaacgaccgcaaggtgtttgtgggccgtttcaagtccaggaaggagaga
gaggcagagatgggagccaaagccaaagagttcaccaatgtttacatcaagaattttggc
gaggacatggataatgagagattaaaggagctctttgataaatatggtaaaatactaagt
gtgaaggtcatgactgaccccacaggtaaatctcgtggatttggctttgtaagctatgag
aagcatgaggatgcttacaaggctgtggaagagatgaatggcatggagttgaacagtaag
accatgttcgttggccgagctcagaaaaagatggagagacaagcagaacttaagaggaag
ttcgaacagctcaaacaggaaagaatcagcagatatcagggtgttaatttatatatcaag
aatctcgacgacaccattgatgatgaaaaacttcgtaaagagttctctcctttcggctcc
atcaccagcgccaaggtgatgttggaggatggcaggtccaaaggttttggctttgtgtgt
ttctcctcacctgaggaggccacaaaggcagtgacagagatgaacgggcgtattgtgggc
tccaaaccattgtacgtggctctggcacagcgtaaagaggaaagaaaagctcatctgacc
aaccagtacatgcagcgtattgctggcatgagggccatgcctgccaacgccatcatcaac
caattccagcctgccagcggatatttcatgccagctgtgccacaggctcagaatagaacg
acatactatgcaccaaaccagctcacccagatgcgtccaaaccctcgctggcagcagcag
ggaggcagaggtcagggtgggttccagggcatgcccagctccttgcgccagccagggccc
cgtgccaacatccgccaccttgcacccagtgcttccacccaaggcccacgcggaatcccc
acaggtgcacagagagtgggaggcaatggccaaccaatgggtccccgcactgccatgggg
gtgacaaatccacgtgccatgcccccatacaagtacgccaccaccatacgaaatacccag
cctcaagtagtgcagcccattactctgcaacaggctcagcctgcagttcatgtgcaaggt
caggatcccctcactgcctccatgttagctgccgccccacctcaggaacagaaacagatg
ctcggtgagcggttgttccctctcatccaggcgatgcaccccagtctagccgggaagatc
acaggaatgctgctcgagatcgacaattctgagctgctgcacatgctggagtcccatgag
tctttgcgctccaaggtggaggaggctgtcgcagtgcttcaggctcatcaagccaagaaa
gacgccacacagaaagtgggagtcaacgctgcgactgcagctgcaacatcctga
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