Myxocyprinus asiaticus (Chinese sucker): 127410927
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Entry
127410927 CDS
T08782
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127410927
03041 Spliceosome [BR:
masi03041
]
127410927
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127410927
Spliceosome [BR:
masi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127410927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
127410927
NCBI-ProteinID:
XP_051502139
LinkDB
All DBs
Position
20:42408585..42472143
Genome browser
AA seq
1294 aa
AA seq
DB search
MEAVKAFNGELYSLNEYKPPISKAKMTQITKSAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSKNIIATFQNLYRCPTDDKSKIVRVLNLWQKN
NVFKSDIIQPLLDMAAGLPPPSVTPVSASSAVPMNSTTPGTPATPATPANIVPSLPDWAS
QISNTDTVAAVAQILQSPQGQQLQQLVQSLQMQQQKPQPSLLQALDAGLVVQLQALTAQL
TAAAAANTLNPLEQRVSSFNKKLLGQFDFGNESERNEDSKKDAASSQLPVVSESINNSIF
HQLAEQLQQQNLEQFQKQLLEHQQHQQKPMTIEGQESIFGLDNSAPPGQNSAPPQVSEQE
AKLDDSIDNQQQDMDIDEGQDTVDEEIFESEEKKTSSTCSRTRSRSRSRSPKRRRSRSRS
GSRKRKHRKRSRSRSRDRKRKSSRSYSSERRAREREKERQKKGLPPIRSKFLSVCSTTLW
VGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYICMVHRQDAYRALQKLSTGSYKIG
SKVIKIAWALNKGVKQEYKQFWDVDLGVTYIPWEKVKLDDLDDFAEGGMIDQETVNNEWE
ALRNTEATKDTSSQAVAAEASTASSTPSEAFTQPITMMPVQIPVAQTVSAVGLVPPSFPV
TMAMPPPGFGPPPPFLRAGFNASQPPPGFMATPGVAPAAVGTSLASAQTPLVQPSMPTTQ
ENSKNSPFGAMIPPTSTIPGSFIPSAMPGAGVFNPVGAQPPQSSTDKMSQSADIMETTPE
ITLQGMQNAVRSGMGLLGMHPSASLSHPLSGQRMAGLIPLELRPNLLQGTGGRFPLLMQQ
GLAHQANNLLDASLQAQARTRAPFSHMEQFSRTEGAFARAPNPSPAGADGLAKNHNQTLP
RSDVGAQQEGDQDYRFPPPEKQSTGLLKTPPLEMRTEPVPSRPPLLERPPRALLQAEGRR
ETMSGGFRAESRWGPPRGDFDERDMRGMSGTPKGFQEERSNPNFQSRFEGRSGSGPAWNR
GAGTSFNANMHQDYDDRRRPWERQKDRDDRDVDFRGEMNGNRHSRERDRDRERERERNRD
RERGREWNRERERERERERDNEKDIERERGRWTPLTTQSQPLLPQPQLPKSQPLLPLPTP
LLAQPQGQAQTDLPTTPTPQQEPQPELQPTQPVAETQPEMKPELQSQPKPLNPPEKATSS
QEQKEAFSVNGPETDSKPQSNIMEPASHPTTEPSCSPSPSRTSTPTCFQNEPLKEEKTPE
MSVSSSENADMEKTGPKVDAETEPELAKTDTEET
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtcaaggcatttaacggcgagctgtactcactgaatgaatacaagccaccg
atctccaaagcaaagatgacccagatcacaaaatcagcaattaaagctataaagttctac
aagcatgtcgtccaaagtgtggagaaattcattcaaaagtgcaagcccgagtacaaagtt
cctggtctgtatgtgatcgactccattgtgcggcagtctcgtcaccagtttggtcaagaa
aaagatgtttttgctccccgctttagtaaaaacattattgcaacgttccagaacctctac
cgctgccccactgatgacaagagtaagattgtccgagtgctgaacctatggcagaagaac
aatgtcttcaagagtgacatcatccagcctcttctggatatggcagcagggctcccaccc
cccagcgtcacgcccgtctctgccagtagtgctgtacccatgaacagcactacccctgga
actcccgcaactccagccaccccagccaacatcgtgccaagtctcccagactgggcgtct
cagatctccaacacagacacagtggctgcagtcgctcagatcttacagagccctcagggc
caacagttgcagcagctggtgcaaagcctgcagatgcagcagcagaagccacagccttct
ctgctgcaggcgctggatgcagggctggtggtgcagctgcaggccctgactgcgcagctc
actgcagccgcagcagccaacacactcaacccactggagcagagagtgtcctccttcaac
aagaagcttttgggtcagttcgattttgggaatgagtcggagcgcaatgaggattcaaaa
aaagatgctgcatcatctcagttacctgtggtgtctgagtccatcaataactcaatattc
catcagctggctgagcaactccagcagcaaaacctagagcagtttcagaaacaactactg
gagcaccagcagcatcaacagaagcccatgaccattgaaggccaggaaagcatctttggt
cttgacaattctgcccctccgggccaaaacagtgccccaccacaggtctctgaacaagaa
gcaaaattggatgactccattgataaccaacaacaggacatggatattgatgaaggacag
gatactgtagacgaggagatctttgaatctgaagagaagaaaaccagcagcacctgctca
agaacgcgttcgagatctcgctctaggtcacccaagagaaggaggtcaaggtcacgttct
ggctcacggaagcgtaaacacaggaagcggtcacggtcacggtcaagagaccgaaaaagg
aagtcctcccgttcttattccagtgaacgacgagcacgggaaagagaaaaggaacgacag
aaaaaagggcttcctcccatccgctcaaagtttctcagtgtttgcagcactactctatgg
gttggccaagtggacaagaaggccacccaacaagatcttacaaacctctttgaagagttt
gggcagattgaatctatcaatatgattcctcccagaggctgtgcgtacatctgtatggtg
catcgacaggatgcataccgtgccctacaaaaactgagcactggctcctacaagattggc
tcaaaggtcatcaaaattgcctgggccctaaataaaggtgttaaacaggagtataaacag
ttctgggatgttgaccttggggtcacttatatcccatgggagaaggtcaaactagatgac
ctggatgattttgcagagggaggcatgattgaccaggagacagtcaacaatgaatgggaa
gctctacggaacacagaggcaaccaaagatacttcgagtcaagctgtggcagctgaagcc
agtacagcgagcagcacacccagtgaggcctttacacagcccatcaccatgatgcccgta
cagattccagtggcacaaacagtctctgctgttggccttgtgcctccatccttccctgtc
accatggcaatgcccccaccaggctttggtccccctccaccctttctaagggctgggttt
aatgcatcacaacctcccccaggtttcatggccactcctggagttgcacctgcagcggtt
ggaaccagtcttgcttcggcacagacccctctagtgcagccttcaatgccaaccactcaa
gagaacagcaagaattctccatttggagctatgattcctcccaccagcactattcctggg
agttttattccatcagcaatgcctggggcaggagtctttaaccctgtgggagcacagcct
ccacagagcagcacagacaaaatgtctcagtctgcagatattatggagacaacacctgag
ataacactacagggaatgcagaatgcagtgcgcagtggaatgggtcttctgggcatgcac
ccctctgcatccctaagtcatcctctctctggccagcgcatggcaggtctgattcctctg
gagctgcggcccaacctactccaaggaactggaggccgcttccccctccttatgcagcag
ggccttgcacatcaagccaacaacctcctggatgcttcccttcaagcccaagcacgtact
cgggcccccttctcccacatggagcagttcagtcgcaccgagggcgcttttgctagagca
cctaacccatcacctgctggagctgacggtctggcaaaaaatcataatcagacgctaccc
aggtcagatgtaggtgcccaacaagagggagatcaggactaccgttttccaccaccagag
aagcagagcacagggttgttgaagactcctcctttggagatgcgtactgagcctgtccct
tccagaccacctttactggaaagacctccgagagcactcttgcaagcagagggtagaaga
gaaactatgtcggggggtttcagagcagaaagtcgctggggtccacccaggggggacttt
gatgaacgagacatgagagggatgtctggaactccgaagggtttccaagaggagcgttcc
aaccctaactttcagagtcgttttgagggccgcagtggatcaggaccagcttggaaccgt
ggagctggaacttcttttaatgccaacatgcaccaggactacgatgatcgtcgcagacct
tgggaaaggcagaaagaccgtgatgacagggacgtggacttccgaggtgaaatgaacggc
aatcgccacagccgggagcgagacagagaccgcgaaagggagagagaaaggaatcgggat
cgtgaacgtggcagagaatggaatcgcgagagagagcgtgaacgggagagggaaagggac
aatgagaaggacatagagcgggagaggggccgctggactcctcttactactcagtctcag
ccactcttgccacagccccaacttcccaagtctcaaccgctactccctctgccgaccccc
ttgcttgcccaacctcaaggacaggcgcaaactgacttgccgactacgccaaccccgcag
caagagcctcagccagaactgcaaccgacacaaccagttgctgaaacccaaccggaaatg
aagccagagctgcagtcacagcccaaacctctcaacccccctgaaaaggcaacaagcagc
caagagcagaaggaagccttcagtgtcaatggaccggagacagactcaaagcctcaatca
aacattatggaacctgcatcccaccctacaacagagccctcttgtagcccatctccatcc
cgtacctccacacccacctgcttccagaacgagcccctgaaagaagagaagaccccagaa
atgtctgtttcctcttctgagaatgcagacatggaaaagactgggccaaaggtggacgct
gagactgaacctgagctagcgaaaacagacactgaggaaacataa
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