Myxocyprinus asiaticus (Chinese sucker): 127412189
Help
Entry
127412189 CDS
T08782
Name
(RefSeq) TATA-binding protein-associated factor 172-like isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127412189
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
127412189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TPR_Trm732_C
HEAT_2
Vac14_Fab1_bd
HEAT_EZ
Arm
Motif
Other DBs
NCBI-GeneID:
127412189
NCBI-ProteinID:
XP_051504308
LinkDB
All DBs
Position
21:7997150..8054966
Genome browser
AA seq
1865 aa
AA seq
DB search
MIMSSLSFSRLERLFILLDTGTTPVTRKAAAQQLGDVVKLHPHELNNLISKVLTYLRSPN
WDTRIAAGQAVEAIVKNIPEWNPAPKPKDEVFSEDMSPEDSSSDRLSFYRFDISRLLKHG
ASLLGSAGAEFEIQDDKSDETDPKERLARQRKQLQKKLGLDIGAAIGMDTEELFNDEDLE
DVCVSSTNITQSSKSLGCPLSRNHMPAAELIDSEFRPGMSNRQKNKAKRMAKLVAKQRSR
DMDPNEKSNDSFEGEPEEKRRKTTNVVIEQPATDSKVLIDNVPDNSSLFEETQEWPLESF
CDELCNDLFNPSWEVRHGAGTGLREVLKCQGAGGGKMVGYTADQMERQHQEWLEDLVIRL
LCVFALDRFGDFVSDEVVAPVRETCAQTLGVALRHMTDSGVAMTVDILLKLLTEDQWEVR
HGGLLGIKYALAVRQDLISELLPRVLPAITEGLKDLDDDVRAVAAAALIPVVDGLVQLQP
TKVPFIVYTLWNALLELDDLTSSTNSIMTLLSSLLTYPQVRQCSMQQSLTVLVPRVWPFL
RHTIASVRRAALETLFTLLSKADQSCAVWLNPIMQDMLRHIFQSCILESNQEILVLIQKV
WGELLRQAPQQYVVAASCPWMGAWLCLMMQAPHIPIDPNMLLEVKARLKEKASGKTRQGS
APVKEMVQEYIGGAETIIEDPATRDHVVTRARLMAAKLLGALCSCICDPRLNSSSQELRP
AESLAQLLLFHLNSKSALQRIAVAMVICEWAGLQKECELLSSVVQPRLLVILSEQLYYDE
IAIPFTRMQNECKQLIALLADAHIDVSERMNCTVFTIDQANELVTTIFSECTSSLNLKSR
QFQPLDSKMLQARSTVCETSAEWQQLQLRVHTFAACAVVGLAMLPNKLNPVVRPLMEAAR
REENTLVQGYAASNIARLLQLCASRSPCPNSKIIKNLCSSVCVDPMLTPSAACPVPPTST
PTVQESSKASVAEKDAMHHMVNKTKGIITLYQHQKAAFAITSKRGPTPKAPKTTTNDLPL
GSSIAAETGESKKPYLIQRRGAEFSLTTIGRHFGQELTSALPYLWESMTGPLRNTLDAQR
FDSSQLLKQGDSVAQELVNSLQVLEVTAGAMTHGLIPLVMEQLPLLCTCLQHPYTAVRHM
AARCVGVLSKIATMETMNVFLEHVLPWLGAIDDNTKQEGAIEALACVMEQLDVDIVPYIV
LLVVPVLGRMSDPCDSVRFMATQCFATLIRLLPLEAGIPDPPSMSEDLIRQKARERHFLE
QLLDGRKLDSYKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICIL
AGDHFLRAQEYTRTKGPDCCPLPSIVMCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTE
RARLQHQVKKHNLVVASYDVVRNDIDFFRDIKFNYCILDEGHVIKNGKTKLSKAIKQLTA
NYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAG
VLAMEALHRQVLPFLLRRMKDDVLQDLPPKIIQDYYCNLSPLQVQLYEDFSKSRAKVNVD
DVISTASAQEEEEKPKLKATGHVFQALQYLRKLCNHPSLVLTPQHPEYKHITEQLASQHS
SLRDIHHAPKLSALKQLLLDCGLGSAGSSDGGTEAVVAQHRVLIFCQLKSMLDIVEQDLL
KPQLPTVTYLRLDGSVQAGLRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVE
HDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMTIANTVISQENAS
LQSMGTEQLLNLFTLDKDEKADKSEASSSSGKDGMKSVLDGLGDLWDQQQYENEYDLDGF
MHSLK
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atgataatgtcctctctctctttctccaggctggaacgtctgtttatcttactggataca
ggtacgactcctgtgaccaggaaagcagctgctcaacagctgggagatgttgtcaaactt
cacccacatgagcttaataacctgatttcaaaggttttaacatacttgaggagtccaaac
tgggatacgcgaatcgctgcgggacaggctgtcgaagccatagtgaagaatattccagaa
tggaaccccgctccaaagccaaaagatgaggtgttttcagaagacatgtctccagaggac
agctcctcagacaggctgagcttctacaggttcgatatctcccgtctgctcaagcatgga
gcatcgctgctcggctctgctggtgctgaatttgagatacaagatgacaaatccgacgag
actgatccaaaagaacgtttggcccgacagaggaaacagttacagaagaagttgggattg
gatataggtgctgcgattggcatggacacagaggagctttttaatgatgaggacctggag
gatgtctgtgtctccagtacaaatataacacagtctagtaaaagcctgggttgccccctc
tcacgaaaccatatgccggcagcagaactcatagattcagagtttcgcccaggaatgagc
aatcggcagaagaacaaggccaagaggatggcaaaactggttgcaaagcagagatccaga
gacatggatccaaatgagaagagcaatgacagctttgagggagaaccagaggagaaacga
cggaaaaccacaaacgtagtcatcgaacagccagcgacagacagcaaagtcttaattgat
aatgtccctgataactccagtttatttgaggagacacaggaatggccactggaaagcttc
tgtgatgaactgtgcaatgatctcttcaacccctcatgggaggttcgtcatggtgctggc
acgggactgagagaagtgctgaagtgtcagggtgctggcggaggaaaaatggttggctat
acagcggatcagatggagcgacagcatcaggagtggctggaggatttggtcatacgcctt
ctgtgtgtctttgctttggaccgatttggagactttgtgtcagatgaggtggttgctcct
gtcagagagacgtgtgctcagactctgggcgtggctttgaggcacatgacggacagtggt
gttgccatgacggtggatattctgctcaagctgctaactgaagaccagtgggaggttcga
cacggaggcctgctgggcatcaaatacgcccttgccgtcagacaggatttgatctcggag
ctgctgcctcgagttcttcctgccatcactgaagggctgaaagatctggatgatgatgtt
cgtgccgtggcagcagcagctttaattccagtggtggatggattagttcagctacagcct
actaaggttcccttcatcgtttacactttgtggaatgctctgttggagctggatgatctt
acatcctcgaccaacagcatcatgaccctcctgtcctccctgctcacctacccacaggtc
cgccagtgcagcatgcagcagtctctgacggtgttggttcctcgagtgtggccgttcctg
agacataccattgcatctgttcgtcgggcagccctagagaccctctttacactgctgtcc
aaagctgaccagagttgtgcggtttggctgaatcccatcatgcaggacatgttaagacac
atttttcagtcctgcatcctggagagcaatcaggagatcctagtgctgattcagaaggtg
tggggggagttgttgcgacaggccccgcagcagtatgtggtggcagccagttgtccctgg
atgggtgcctggctctgtttgatgatgcaagcaccacacatcccaatagaccccaacatg
ctattagaagtgaaggcccgtttaaaggagaaagcctctgggaagacccgacagggatct
gctccagtcaaggaaatggtccaggagtacattggtggagcagagacgatcattgaagac
cctgcaacacgagaccacgtggtgactcgtgcacgtctaatggctgcaaagctgttgggg
gcgctgtgtagttgtatctgtgacccgcggctgaacagctcctctcaagaactccgcccg
gctgagtctctggctcagctcttactgttccaccttaactccaaatcggccctgcagcgg
attgcagttgccatggttatctgtgagtgggcaggcctccagaaggagtgtgagctgctg
tccagcgtggttcagccccgtttgctggtcatcctctctgaacaactttattatgatgag
atcgccattcctttcacacgcatgcagaacgaatgcaaacagctcatagcgctgctggct
gacgcccacatcgacgtgagcgaacgaatgaactgcacggtgtttaccattgatcaggcc
aatgagctggtgaccaccatcttctcagagtgcacctcctctctgaacctgaagtcgcgt
cagttccagccgttggacagtaaaatgctgcaggctcgttccaccgtgtgtgagaccagt
gcagagtggcagcagctgcagctgagagttcacaccttcgcggcctgtgctgtggttgga
ctggctatgctgccaaacaagctcaaccctgttgtcagacccctgatggaggcagcacgc
cgtgaagagaacacgcttgtgcagggttacgcagcctccaacattgctcgtctgctgcag
ctgtgtgcttccagatctccctgccctaactccaaaatcataaagaatctctgcagctct
gtgtgtgtagatccgatgctcacacccagcgctgcctgtcctgttccaccaaccagcact
ccgacagtacaagagagcagtaaagcatctgtggcagagaaagacgcaatgcatcacatg
gtgaataagacaaagggcatcatcactctttaccaacaccagaaagcagcttttgccatt
accagtaagaggggacccacccccaaagcccccaaaaccaccactaatgacctgcccctc
ggaagcagcatagctgcggaaacaggcgagagcaagaagccataccttatccagaggaga
ggagcagagttctctttaacaacaatcggcaggcatttcggtcaggagctgacgagtgct
ttgccatatttgtgggagtccatgaccggccctctgaggaacacattggatgctcagaga
tttgattccagccagttgttgaagcagggagattcagttgctcaggagcttgtgaactct
ctccaggtgctggaggtcacagctggagccatgacccatgggctcatccctttagtgatg
gagcagctgcctctcctgtgcacctgtctgcagcatccatacacagctgtacgtcatatg
gctgctcgctgtgtgggtgtgctcagtaagatcgctacgatggagaccatgaatgtgttc
ctggagcatgtgctgccctggttaggtgctattgatgacaacaccaaacaagaaggagcc
attgaagcgttggcctgtgtgatggagcagctggatgtggatattgtgccctacattgtg
ctgctggtggtccctgtgctgggccgcatgagtgacccctgtgacagtgtgagattcatg
gcgactcagtgctttgctactctcatcagattgctcccgctcgaggctggaatcccagac
ccaccgtctatgtctgaagatctgattcgccagaaggccagagagcggcacttcctcgag
cagctgctggatggaagaaaactggacagttacaagattccagtgcccatcaaagcagag
ctcagaaagtaccagcaggatggtgtgaactggctggcgtttctcaacaagtacaagctt
catgggatcttgtgtgatgatatgggtctgggtaagaccctgcagtccatctgtatactg
gcgggtgatcatttcctcagggctcaagagtacactaggacgaagggtccagattgttgc
cctttgccctctatagtgatgtgtccacccaccctaactggccactgggtggatgaggtt
ggcaaattttgctctaaagagtatctcaatcctttgcactatacaggcccccccacagaa
agagcacggttacaacaccaagtgaaaaaacacaatcttgttgttgcctcatatgatgtt
gttaggaatgacatcgactttttcagggatattaaatttaattactgtatccttgatgag
ggtcacgtcattaagaatgggaagactaaactctccaaggcaatcaagcagctaactgcc
aactatagaataatcctttcaggaacaccaattcagaacaatgttctggagttatggtca
ctctttgacttcctgatgccaggctttcttggtacggagcggcagtttgccgcccgctat
gggaagcctatccttgccagtcgagatgctaaaagttcctcacgggagcaggaagcaggt
gtgttggcaatggaggcactgcatagacaggttcttcccttcctcctgaggagaatgaag
gatgatgttcttcaagatctgcctcccaagatcatacaagattactactgcaacctcagt
cctctacaggttcaactgtatgaagacttttcaaagtcgcgtgcaaaggtgaatgtggat
gacgtgatctccactgcatctgcgcaagaggaggaagagaagccaaaactcaaggccact
ggacacgtcttccaggctctgcagtacttgaggaagctgtgcaatcacccatcgctggtg
ttgactcctcaacacccagaatacaaacacatcaccgagcagctggccagccaacactcc
agcctccgagacatccaccacgcaccaaaactctctgccctcaaacagttattgttggac
tgtggactgggttctgctggttcgtccgatggtggcacagaggctgtggtggctcagcat
cgggttctgatcttctgccagctgaagagcatgctggacattgttgagcaggatttgctc
aaaccacaactgcccactgtcacttacctcagactggatggaagtgttcaggccggcctc
agacactccatagtctccaggttcaataatgacccgtctatagatgtcctgctgctcacc
actcacgtgggtggactgggtttgaatctgacgggggctgatactgtagtgtttgtggag
cacgactggaaccccatgagagacctgcaggccatggatcgagcccacagaataggacag
aaacgtgtggtgaatgtgtatcgtctcatcacacgtggaacactggaggagaagatcatg
ggtctgcagaagtttaagatgaccattgctaatacagtcatcagccaagagaatgccagc
ttgcagagcatgggcacagaacagctactcaacctcttcacactggacaaggatgaaaag
gcagacaagagtgaggcgtcgtcatcctctggtaaagatggtatgaagtctgttcttgat
ggactgggtgacctgtgggaccagcagcagtatgagaatgaatacgacctggacggcttt
atgcattcactcaaatga
DBGET
integrated database retrieval system
