Myxocyprinus asiaticus (Chinese sucker): 127412257
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Entry
127412257 CDS
T08782
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
127412257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
masi03036
]
127412257
03400 DNA repair and recombination proteins [BR:
masi03400
]
127412257
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
127412257
DNA repair and recombination proteins [BR:
masi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
127412257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Pneumovirus_M2
SesA
Motif
Other DBs
NCBI-GeneID:
127412257
NCBI-ProteinID:
XP_051504441
LinkDB
All DBs
Position
21:complement(18108978..18130876)
Genome browser
AA seq
1428 aa
AA seq
DB search
MCALVNKHPKLFSEIILIHSYLAMPVEGNKDQDLHSLSSPVSALTPGVQDDNGLSVPGSS
KEEPVATCPESVGAQNSRKLQPLLQINRQEIRSVDQSSQAAELQGLGVDVYDQDVLEQGV
LQQVDRAIQEASQAAAKAEAEKEYESVLDDVRSCTSALKHINKILEQLAPHAASSKDISR
KLESVKRQKENKEKQLKKIRAKQKRLQAILGGEDFQKLEADLLIEDDEEPGPSTLGSMLM
PAQETEWEELIRTGHMTPFGSRIPQKQEKKEPRKVMLSENSGFDKYLTDQALLAESRKRP
TSMKKISRKHSTEAMDGKAQRNGSLSTKDKKLQKRMRKLQRTALRAHPKARPKVEKEPPQ
SRRKGLGEQASDSEGSEYVPSDELMDPEEPERDNEFWVDEEEEYELKPYKKKNQAKTRKP
KVEESDEYIPSSSEDEDSQKGGKVKKCKDDGDIECYRQRIRKWKRQRLREKEAKRIAGEE
ESEDSDAEFDEGFKVPGFLWKKLFKYQQTGVRWMWELHCQQTGGILGDEMGLGKTIQIIA
FLAGLSYSKLKTRGSNYRYAGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHDTGSFT
SKKEKLIPEIVASHGILITSYSYIRIMQDYIQKYDWHFVILDEGHKIRNPNAGVTMACKQ
FRTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV
QTAYKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEDQRQVYQNFLDSKE
VYQILNGDMQVFSGLIALRKICNHPDLFTGGPRLLRGIPHEQLTEEEHFGYWKRSGKMIV
VESLLRLWFKQGHRVLLFTQSRQMLEILELFVRENRFSYLKMDGTTAIASRQPLITQYNQ
NKDIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKQQVTVYRLL
TAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDIYELFTLSNPEGSQGTETSAIFA
GTGSDVQIPKKQKTSRPSQGTSQPSQSQSSAFSVDDQDAISQSENKNATSINSLSKNDAK
RDRSDFGSPNNHFKSHSIADLSTKSASKDLCSANSSQKHREKKKHCETPEKNNSHSDGHK
RKHKKRKHSEDARFEGHRISHLVKKKRYKKEENEEEEKRKDERKSDDYVLAKLFKKSGIH
SVMKHDTIMESSNPDYVLVESEANRVAKDALRALKISRQNCRLPFSRGSTQATPPPVKKR
FGQKKNSLLSQSSGIKVKSSEKCKDAYIIKKSGVKKPGSAAHFSGEGAEEESASLSSSSL
LAMMRARNHVSHPQRQEDEEEEEERRTQSAAVHATPTEHDELLVDLRNFVAFQAQADGQA
STKEILEYFTPRLNSTQTPVFRELLRNICEFHRLPGQEGMWKLKADYR
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgccttagtaaacaaacatcctaagttattttctgagatcatccttattcacagt
tacttggcaatgccagtagaaggtaacaaggaccaggacctccattccctgtccagccct
gtcagtgccctgactcctggagttcaagacgacaatggcctttcagtcccaggaagcagt
aaggaagagcctgtggccacatgtccggagagtgtaggggcacagaattctcgaaaattg
cagcctctgcttcagatcaaccgtcaggagatccgctcagtggaccagagctctcaggct
gctgagctccagggtttgggagtggatgtatatgaccaagatgttctcgagcaaggtgtg
ctgcagcaggtggacagggctattcaggaggccagccaggctgcagccaaagctgaagca
gagaaagaatatgagtcagtgctggatgatgttaggtcatgcacaagtgctttgaagcac
atcaacaaaattctggagcagttagcccctcatgctgcttccagcaaggacataagtcgg
aagttagagtctgtcaaacgacagaaagagaacaaggagaagcagttaaaaaagatcaga
gccaagcagaagagactgcaggccattcttggaggagaagattttcagaagcttgaagca
gatttattgattgaagatgatgaagaaccaggtccttccacgttgggcagcatgcttatg
cctgctcaggagacagaatgggaagagctcatccgcacaggtcacatgaccccctttggt
tcacggatcccacagaagcaagagaagaaggagcctcggaaggtcatgctcagtgagaat
tccggttttgacaagtatctcacagaccaagccttgttagcggagagcaggaagagaccc
acctcaatgaagaagatttccagaaagcactcaacagaggccatggatggcaaagcgcag
aggaacggatcgctgtccaccaaagataagaaactccagaagcgtatgcgtaagctccag
aggaccgccctgagagctcaccccaaagccaggcccaaggtggagaaggagcctccgcaa
tctaggaggaaaggcttgggggaacaggcatcagacagcgagggctctgagtacgttcct
agtgatgagctgatggatcctgaggaaccagagagagacaatgagttctgggtggatgaa
gaagaagaatatgaacttaaaccttacaagaagaagaaccaggcgaaaaccaggaagccc
aaggtggaagagagtgatgaatacatccccagcagctcagaggatgaggactcccagaaa
ggggggaaagtcaagaaatgtaaagatgatggagatattgagtgttacaggcaaaggatt
aggaagtggaaaaggcaaagacttcgggaaaaagaggcaaagagaatagcgggagaggag
gagtcagaggacagcgacgcagagtttgacgaaggttttaaggtgcctggtttcctctgg
aagaaactcttcaagtatcagcagacaggtgtcaggtggatgtgggaactgcactgccag
cagacaggaggcattctgggagatgagatgggcctgggcaagaccatccagataattgcc
ttcctggcaggcctgagctacagcaagctgaagacacgtggctccaattacaggtatgct
gggctggggcccacagtcatcgtgtgtccagccacagtcatgcatcagtgggtaaaggag
ttccacacatggtggcctccattccgtgtggctgttctccacgacacaggctcctttacc
agcaaaaaggagaagctcataccggagatagtggccagtcatggcatccttatcacttcc
tactcatacatacgcattatgcaagactacatccagaagtacgactggcattttgtcatc
ctggacgagggccacaagattaggaaccccaatgctggggtaacaatggcatgcaagcag
ttccggacaccccaccgtttcatcctttcgggctcacccatgcagaacaacctcaaagag
ttgtggtcgctctttgactttgtgtttccagggaagctggggactttgcctgtcttcatg
gagcagttctctgtgcccattaccatgggaggatactctaatgcatctccagtacaggtc
cagacagcctataaatgtgcttgtgttcttcgtgacaccattaacccttacctgcttaga
agaatgaaggctgatgtgaaagcaaacctctccttacctgataaaaatgaacaggtcctg
ttctgcaggctaactgaagaccagcgccaggtttaccagaactttctggactccaaagag
gtttatcagattctgaatggagacatgcaggtgttctcaggcctcatagctctgaggaag
atctgcaaccacccggatctgttcacgggcgggccgcgtttgctgcggggcatcccacat
gagcagctgaccgaggaggagcacttcggttactggaagcgatctgggaagatgattgtg
gtggagtcactgctacgcctgtggttcaagcagggacacagagtgttgcttttcacccaa
tccagacagatgctggagatcttggagctgtttgtgagggagaatagattctcctatctc
aagatggatggcaccaccgccattgcatccagacagcctctcatcactcaatacaaccag
aacaaggacatctttgtctttctcctgacaactagagttggaggtttgggagtcaacctg
actggagcaaatagggttgtaatctatgacccagactggaaccccagcacagacactcag
gcacgtgaacgggcctggaggattggccaaaaacagcaggtgacagtttacaggctgttg
acagctggaaccattgaagagaagatttaccacagacaaatcttcaaacagtttctcacc
aaccgagtgctaaaggatcctaagcaaagacggtttttcaaatctaatgacatttatgaa
cttttcactctgagcaatcctgagggctcccagggaacagaaaccagtgcaatatttgca
ggcacaggatcagatgtgcagattccaaaaaaacaaaagacatcccgtccatctcagggg
acatcacaaccatcacagtctcagtcatctgcattttctgttgatgaccaagatgccata
tctcagtcagaaaacaaaaatgctacctctattaacagtctctcaaaaaatgatgctaaa
agggacagatctgattttgggtcaccaaacaatcacttcaaatctcattccattgctgat
ctttcaacaaagagtgcaagtaaagatctttgttcagcaaacagctctcagaagcacaga
gagaagaaaaagcactgtgaaacaccagaaaagaacaactcgcactcagatggacacaaa
cgcaagcataaaaagcgcaagcactccgaggatgccagatttgagggccatcgtatttct
cacctggtgaagaaaaagaggtacaagaaagaggaaaatgaagaggaggagaagaggaaa
gatgagagaaagagtgatgattatgtcttagccaaactcttcaaaaaatcagggatccac
agtgtcatgaagcatgacactatcatggagtcatcaaacccagactatgtgcttgtggaa
tctgaagccaacagggttgccaaggatgcactgagagctctgaagatctccaggcaaaac
tgtaggctgcctttctcaagagggtctacacaagcaaccccacctccagtcaagaaaagg
tttgggcagaagaaaaactcactactttctcagtcatctggtataaaggtaaaatcatca
gagaaatgcaaggatgcatatatcataaagaaatcaggtgttaaaaagccaggatctgct
gctcacttcagcggtgaaggagcagaggaggaatctgcttctctgtcctcatcctctctt
ttagctatgatgagggccaggaatcacgtcagtcacccccagagacaagaggatgaggag
gaagaggaagagagaaggacacaatctgctgctgtacatgcaaccccaacagaacacgat
gagcttctggtcgacctgaggaactttgtggccttccaagctcaggcggatggccaggcg
agcaccaaggagatcctagagtactttaccccaagactcaactccacacagacaccagtt
ttcagagaactgctaaggaatatctgtgagttccacagacttcctggacaagaagggatg
tggaagcttaaagctgactacaggtaa
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