Myxocyprinus asiaticus (Chinese sucker): 127412279
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Entry
127412279 CDS
T08782
Name
(RefSeq) CDK-activating kinase assembly factor MAT1 isoform X1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03022
Basal transcription factors
masi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127412279
09124 Replication and repair
03420 Nucleotide excision repair
127412279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127412279
03400 DNA repair and recombination proteins [BR:
masi03400
]
127412279
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
127412279
DNA repair and recombination proteins [BR:
masi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
127412279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
TRAF3_RING
zf-UDP
zf-C3HC4
DUF2096_N
zf-RING_2
DUF604
NttE
TRAF6_Z2
zf-P11
HAUS6_N
Motif
Other DBs
NCBI-GeneID:
127412279
NCBI-ProteinID:
XP_051504472
LinkDB
All DBs
Position
21:complement(17405926..17438941)
Genome browser
AA seq
309 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVEMLFVRGSGNCVQCNTPLRKSNFRI
QLFEDPAIDKEVEIRKKVLKIYNKREFDFSTLKEYNDYLEQVEEIVFNLTNNVDTERTKQ
IMEQYQRDNRDIIQRNKAKLTREQEELEELLLQEQQDSEQRRLETLQEEQRQLQAKRKNK
QALLDELESSQLPAAVLLAQHKDRATQLGTQIEKQKRNVKPTNLFSTGILMGQTVSLAPV
THVEEVLYVYQPVYIDTYGPPIPELDQLGRLGYLNHVRTASLQDQAGGYSSGLACHRAIQ
DAFSGLFPS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcagggatgcccgaggtgcaagacgacgaaatacagaaatccatctctaaag
ctgatggtcaatgtgtgtggtcacacgctgtgtgagagctgtgtggagatgctctttgtc
cgcggctcaggtaactgtgtgcagtgtaacacacctctcagaaagagtaattttcgcatt
cagctcttcgaagatccagccattgataaagaggtggagatccgcaagaaggttcttaaa
atttataataagagagagtttgatttctccactctgaaagaatataatgactacctggag
caggtggaagagattgtgtttaacttgactaataacgtggatactgaaaggacaaagcag
attatggaacagtaccagcgagacaaccgagacattatacagagaaacaaagccaaactg
acccgtgagcaggaggagttggaggagctgttgttacaggagcagcaggattcagagcag
aggagactggagaccctccaggaggaacaaagacaactacaggccaagagaaaaaacaaa
caggccctgctggatgagctggagagttcccagttacctgcggctgtgctcttggcccaa
cataaagatcgagccacccaactgggaacccagatagaaaaacagaaacggaacgtcaaa
ccaacaaacctcttctctactggaatactgatgggtcagacagtgtctttggctcctgtg
actcatgtggaggaagtgttgtatgtctatcagcctgtgtacattgacacatatggcccg
cccattccagaactggatcagttgggtcgacttgggtatctgaatcatgtgcgcacagcg
tctctacaggaccaggctggtggttattcatcgggactggcatgccaccgtgccatccag
gatgcttttagtggccttttcccctcatga
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