Myxocyprinus asiaticus (Chinese sucker): 127412591
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Entry
127412591 CDS
T08782
Name
(RefSeq) protocadherin-18-like isoform X1
KO
K16499
protocadherin delta 2
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
masi04515
]
127412591
Cell adhesion molecules [BR:
masi04515
]
Cadherins
Protocadherins
127412591
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
127412591
NCBI-ProteinID:
XP_051505026
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Position
22:27889764..27896417
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AA seq
1160 aa
AA seq
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MGTTKYSERNVLFCKTLLKLILLVAVAHNVSGKTLKYRVLEEQRVGTVIARLKEDVAGIL
SKLPSSVSPRFRAMQMGSTPQLSLREEDGEISIATKIDREKLCEKNLNCTIEFDVITLPT
EYLHLFHIQVEVLDINDNAPQFSRAIIPIEISESASVGTRFPLDSAVDPDVGENALHTYS
LTRNNFFKIDIRTRTDGARYADLVVMRELDRETQSSYQLQLTASDSGVPPKSGSTLLKIS
ISDSNDNSPAFDEQAYVVNLLENSALGTLLVDLNATDPDEGNNGKIVYSFSSHVPPKILE
TFKINPENGHITLIKKVDYETTSSYEIDVQAQDMGPNSIPGHCKIIIKVVDVNDNKPKIN
INLMTQGKEEVAYISEASPVDTFIALVRVDDSDSGLNGEVVCRLHGHGHFRLQKTYENNY
MILTNVSLDREKRSEYSLTVIAEDRGSPSLSTIKHFTVQVQDENDNPPRFEKSRYEIFKS
ENNSPGAYLTSVVATDPDLGSNGQVTYSIVESQVQGSSISTYVTIDPSNGAVYALRSFDR
EEVGQLLFTVQARDGGDPYPLSSNATVLLTVLDENDNPPIIVSPLLSNHTAEVPLWRHAE
PGHLITIIKATDRDAGANSELTCSIIGGNDDALFVFDQRRCELRTNGSVEATGHERFDLA
ILVQDRGASTRLSARAILHISLKDYPESYSLNPSDLNNKSTLDVSMIIIISLGAICGVLL
IVMVMFATRCSREQKDPRHSYNCRVAESTYQNHPKKPARQIHKGDITLVPTVNGTLPVRA
HPRSPSASPAPESRQSHHSHQSLNSLVTISSNHVPENFSLGLAHATPPVEQVSQLLSILH
QGQYQPRPSFRGNKYTRSYRYALNEMDKFSLKDSGRGDSEAGDSDCEMGRESPLLGEGFS
ELFTPDGHHRLHPAMKLCTEECRVLGHSDQCWMPPLPSPASSDYRSNLYIPGEDPQQKTA
PEAPQSGESTLRKKSFSTFGKESEEGEGEAGDGEDLCGTTSLLSEMNSVFQRLLPSSLDT
YSETSETEKPLVCAAGVGSLERRKGHLPGKPNSATYQQGVAVWAANTHFQNPGHGHAPAS
HITALVAPLPAPLPAPMSTSASSSKWLPAMEEIPENHEEDELESVLSHLHGKRCDSRSEI
MDASELVAEINKLLQDVRQS
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgggaacaactaaatactctgaaaggaatgttctattttgcaagacgctcctgaaactc
atacttttggtggccgtggcgcacaatgtttcaggtaagactttaaaatatagagtttta
gaggagcagagagttggcacggtgatcgcaagactgaaagaggacgtagccggcatccta
tccaaactcccgagctccgtgtccccgcggttccgcgcgatgcagatgggcagcactccg
caactttccttgcgcgaggaggacggcgagatcagtatcgcgaccaaaatagaccgggag
aagctctgcgagaaaaacttgaactgcactatcgagttcgacgtgatcactcttcccacg
gaatacctccatttgtttcatattcaagtggaagtgctggacatcaatgacaatgcgccg
cagttctcgcgcgccatcatccccatagagatctctgagagcgcatcggtgggcacgcgc
tttcctttggacagcgctgtggacccggacgtcggagaaaacgcgctacacacgtactcg
ctcacacgtaataactttttcaaaatcgatatcaggacgcgcacggatggcgcgcggtac
gcggaccttgttgtgatgagggaactggacagggagacacagtccagctaccagctgcag
ctcacagcctcagactctggcgtaccgccaaaatctggctcaactctgcttaaaatcagc
atttccgattccaacgataatagcccagcgtttgacgagcaggcttatgtggtcaatcta
ctggaaaattcagcactggggacactgctggtggacctaaacgccacagacccggatgaa
ggcaataacggcaaaatagtgtactctttcagtagtcatgtgccaccaaaaatcctggag
acctttaaaattaacccagaaaatggccacatcactctgattaagaaagttgactatgag
accacttcatcatacgagatagatgtccaggctcaggatatgggtccaaattccattcca
ggccactgtaagataatcatcaaagtggttgatgtcaacgataacaagccaaaaatcaac
atcaaccttatgacccagggcaaagaggaggtggcctacatctcggaggcatcccctgtt
gatacttttatcgcattagtgcgtgtggatgacagcgactcaggtctaaatggagaggtt
gtgtgccgactccatggccatgggcactttcgcttgcagaagacctatgagaacaactac
atgattcttactaatgtatctctggaccgtgaaaaacgctctgagtatagcttgacggtg
attgcggaagaccgtggctcaccaagtctatccaccatcaaacacttcacagtgcaggtg
caggatgaaaatgacaaccccccacgctttgaaaagagccggtatgaaatcttcaagtcg
gaaaacaattcgcctggagcatacctgacctcagtggtggccaccgatccagatttgggc
tctaatggacaggtgacctactccattgtggagagccaggttcaaggaagctccatttca
acatatgtgacaattgacccatccaacggggctgtgtatgcgctccggagctttgatcga
gaggaagtgggccagctcttgtttactgtgcaggctcgggacggtggggacccttatcct
ttgagcagcaatgccaccgttctgctcactgtattagatgaaaatgacaacccgcccatc
attgtttctccattgctgagcaaccacactgctgaggtgccactatggaggcatgctgag
cctggtcatctgataacaattatcaaggcaacagatcgtgatgctggggccaacagtgag
ctgacttgctccatcattggtggtaatgatgacgcactttttgtctttgaccaacgaaga
tgtgagttacgcaccaatggaagtgttgaggccacaggccatgagagatttgatcttgca
atcctggtgcaagacagaggagcctctactcggctttcagcaagggccattctccatatt
agcctgaaggactatccagagagttactcactaaacccttcagacctaaacaacaaatct
acattagatgtttcaatgatcatcatcatctcccttggtgccatctgtggtgtgcttctc
atcgttatggtgatgtttgccacccggtgctcaagagagcagaaggaccccagacattcc
tacaactgcagagtggctgagtccacctaccaaaaccaccccaaaaaacctgcccggcaa
atccacaagggagacatcacattggtccctacagttaacgggacccttcctgtgagggct
cacccccgctccccttcagcctcacctgcgccagagagccgccagagccaccacagccac
cagtcactcaacagcctggtcaccatctcctccaatcatgtgccagagaacttttctctc
ggactagcccatgccacgccacctgtggagcaagtctcacagcttctgtccatacttcat
cagggccagtaccaacccagacccagtttccgtggcaacaaatacacccggagctacagg
tatgctttaaatgagatggataaattcagcctgaaggacagtggaagaggggatagtgag
gcaggagacagcgattgtgagatgggtagggagtcccctctgcttggagaaggcttcagt
gaactctttacccctgatggacatcaccgactgcatccagcaatgaagctgtgcaccgaa
gagtgtcgtgtcctcggtcactcggaccaatgctggatgcctccgctgccttccccagca
tcctctgattaccgtagcaacctctacatccccggagaggacccccagcagaaaactgcc
ccagaagcaccacagtctggagagtcaacattaaggaaaaagagtttctccacctttggc
aaggaaagcgaggagggagagggggaagcaggtgatggggaagacctgtgtggaacaaca
tctctgctgtctgaaatgaacagcgtgttccaaaggctcctcccctcttcgctggacact
tatagtgagaccagtgaaactgaaaagccattggtctgtgctgcaggtgtgggatccctg
gaaagaaggaaaggtcacctgcctggcaaaccaaactctgccacctaccaacagggtgtc
gccgtttgggccgctaatacgcatttccaaaatcctggacatggtcatgcccctgctagt
cacattacggcactggtggctccgcttcccgcccctctgccagctcccatgtcaacatca
gcttcctcctcaaaatggctgcctgcaatggaggaaatcccagagaatcacgaggaagat
gagttagagtctgtgctgagtcatctgcatggaaagcgctgtgacagtcgtagcgaaatt
atggacgccagtgagctcgtagcagagatcaacaaactccttcaagatgttaggcagagc
taa
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