KEGG   Myxocyprinus asiaticus (Chinese sucker): 127412827
Entry
127412827         CDS       T08782                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like isoform X1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
masi  Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:masi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:masi03041]
    127412827
Spliceosome [BR:masi03041]
 Complex B
  Other components
   Complex B specific factors
    127412827
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_EML_2 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 LisH_TPL WD40_Gbeta NBCH_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_ACSF4 Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_VPS8 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_NWD2_C Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N RMC1_N Beta-prop_BBS7 DUF7165 Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_IP5PC_F WD_LRWD1 Beta-prop_RSE1_2nd LisH LisH_PAC1 VPS8_N TFIIIC_delta LisH_WDR26 Beta-prop_NOL10_N zf_topless
Other DBs
NCBI-GeneID: 127412827
NCBI-ProteinID: XP_051505439
LinkDB
Position
22:37776587..37798747
AA seq 538 aa
MSIEIESADVIRLIMQYLKENNLHRTLATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLYRGKAAVKDVEEERFPTQLNRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMSFSRDTEMLATGAQDGKVKVWKIQSGQCLR
RFERAHSKGVTCLSFSKDSTQILSASFDQTIRIHGLKSGKCLKEFRGHSSFVNEATLTPD
GHHVISASSDGTVKIWNLKTTECTSTFKSLGTSAGTDITVNNVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVRPLFLCLSLHSLCSLLNRQLWTMSCHVDIQIQGSHGHGKPENCIFRPGNVTKIFKS
NT seq 1617 nt   +upstreamnt  +downstreamnt
atgtctatcgaaatagaatcagccgatgtgatccgtctgatcatgcagtacctgaaggaa
aacaacttgcatcggactttagcaacactccaggaggagacgaccgtgtccctcaacaca
gtggacagtattgagagttttgtggctgatatcaacagcggtcactgggacactgtactg
caggctatacagtccctcaaactcccagacaagaccctcattgatctttatgaacaggtt
gttcttgagctgatagagctgagagaattaggagctgccagatctttgttgaggcagacg
gaccccatgatcatgctgaaacaaactcaacctgagcgatacatccacctggagaatctc
ctggctcgctcatactttgatcccagagaggcctaccctgatggcagcagtaaggagaag
cgtagagcagctattgctcaggctcttgctggtgaggtcagcgtggtgccaccctcacgt
ctcatggctctgcttggacagtctctaaagtggcagcagcatcagggtcttctgcctcct
ggtatgaccattgatttgtacagaggtaaagcagctgtgaaggatgtagaggaagaacga
tttcccacacagctgaacagacacatcaagtttggtcagaagtctcacgttgaatgcgca
cgtttctctcctgacggtcagtacctggtcactggttctgtggatggatttattgaagtt
tggaacttcaccactggaaaaatcagaaaggatctgaagtatcaggctcaggataacttc
atgatgatggatgatgccgtgctgtgcatgtctttcagtcgagacactgagatgttggcc
acaggagctcaggacggcaaagttaaggtgtggaagatccagagcggtcagtgtctgcgg
cggtttgagcgtgctcacagtaagggtgtcacctgtctcagcttcagtaaagacagcact
cagattctctctgcatcattcgaccagaccatcaggattcatgggctgaaatcaggcaag
tgtttgaaggagttcagaggtcattcttcatttgtgaacgaagccacacttactcctgat
ggccatcatgtcattagtgcctcttccgacggaactgtgaagatctggaatttgaagacc
acagaatgcaccagcacattcaagtctctgggcacctctgctggcacagacatcacagtc
aacaatgtgatcctgctccccaaaaaccctgaacattttgtcgtgtgtaaccgatctaac
actgtggtaatcatgaacatgcaggggcagattgtgaggagtttcagctctggtaagaga
gagggaggtgattttgtgtgttgtactctgtctccgcgtggagagtggatctactgcgtc
ggagaagatttcgtgctttactgtttcagcacagtcactggcaaactagagagaaccttg
accgtaagacctctcttcctctgtctctcccttcattctttgtgttcccttttgaatcga
cagctttggacaatgtcatgtcatgttgacatacaaatacagggttcccacggtcatgga
aaacctgaaaattgtattttcaggcctggaaatgtcactaaaattttcaagtcatag

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