Myxocyprinus asiaticus (Chinese sucker): 127412972
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Entry
127412972 CDS
T08782
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
masi04515
]
127412972
Cell adhesion molecules [BR:
masi04515
]
Cadherins
Protocadherins
127412972
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Protocadherin
Cadherin_C_2
Sigma_reg_N
Motif
Other DBs
NCBI-GeneID:
127412972
NCBI-ProteinID:
XP_051505684
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Position
22:complement(26375869..26452301)
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AA seq
1100 aa
AA seq
DB search
MHSKDMDFVQMLLCFLLCWTSVDAVFNLKYSVEEELRAGTKIANVTADAKVAGFVLGNRQ
PYLRVISNSEPRWVNLSPAGLLITKQKIDRDAVCRQTPKCFISLEVMSNSMEICVIKIEI
IDVNDNAPRFPTNHIDIEISENAAPGTRFPLEGASDPDSGSNGIQTYTITPNDIFGLEIK
TRGDGSKIAELVVEKTLDRETQSRYTFELTAEDGGDPPKSGTVQLNIKVIDSNDNNPVFD
EPAYTVNVLENSPINTLVIDLNATDPDEGTNGEVVYSFINFVSNLTKQMFKIDPKTGVIT
VNGVLDHEELHVHEIDVQAKDLGPNSIPAHCKVIVNVIDVNDNAPEIKLLSENSEMVEVS
ENAPLGYVIALVRVSDNDSGANGKVQCRLQGNVPFRLNEFESFSTLLVDGRLDREQRDMY
NLTILAEDSGHPPLRSSKSFAVKVTDENDNPPYFTKPHYQAMVLENNVPGAFLLAVSARD
PDLGMNGTVSYEIIKSEVRGMSVESYVTVNSNGEIYGVRAFNHEDTRTFEFKVSAKDGGD
PPLTSNATVRIVVLDVNDNTPVMTTPPLVNGTAEVSIPKNAGVGYLVTQIKADDYDEGEN
GRLTYSISEGDMAYFEIDQINGEMRTTKTFGENAKPSYQITVVAHDHGQTSLSASAYIVI
YLSPDLNAQEQIGPVNLSLIFIIALGSIAVILFVTMIFVAVKCKRDNKEIRTYNCRNLME
AFSSPNRGVAEYSYGNQKKSSKKKKLSKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFD
YHQQTLPLGCRRSESTFLNVENQNSRNAVPNHGYHHTFTGQGPQQPDLIINGMPLPETEN
YSINSSYVNSRAHLIKSTSTFKDMEGNSLKDSGHEESDQTDSEHDVQRGHYADTAVNDVL
NMTVPPNNSQLPDQDQSEGFHCQDECRILGHSDRCWMPRMPKPARAKSPEHGRNVIALSI
EATTVDVPHYEDCGTTKRTFATFGKDGPDEERGEQRGRRQTAEPAVCSPKTNGAIREAGN
GREAVSPITSPVHLKSPQSKPPSTYNTLKCRDAERIANHSLLRQPEGKDSEPAMREINTL
LQDGREKESPGSKRLKDIVL
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgcattcaaaggacatggatttcgtacaaatgttattgtgctttctcttgtgttggact
agtgtcgatgctgttttcaatttgaaatattcagtggaagaagagctgcgtgcagggaca
aagatagccaacgtgacggcggacgcaaaagttgcaggttttgtactgggaaaccgacaa
ccttacttgcgggtcatctccaattccgagccgcgatgggttaatctgagccccgccgga
ctgctcatcacaaaacaaaaaattgatcgggacgctgtttgccgacagacaccgaagtgt
tttatctcgttggaggtgatgtcgaactcgatggagatctgcgtgattaaaattgagatt
atcgacgtcaacgacaacgcgccccgcttccccaccaaccacattgacatagaaatctcg
gaaaacgccgctcccggtaccagatttcccctagagggggcaagcgatccggactcgggg
agcaacggcattcaaacttacaccattacccccaatgatattttcggtctcgagattaag
acgaggggagacggctccaagattgcagagcttgtggtggaaaagactttagaccgagaa
acgcagtcgcgttacacgtttgaactcacagccgaggatggcggggatcccccaaagtct
gggactgtgcaacttaacatcaaagtcattgactcgaatgataacaaccccgttttcgac
gagccagcatacactgtaaacgtgctggagaattcgcccattaacacattagtcattgac
ttgaatgctacggatccagacgaaggaaccaatggcgaggtggtttactcattcataaac
tttgtctccaacctgaccaaacagatgtttaaaatcgaccccaaaacaggtgttataacc
gtgaacggcgttttggaccacgaagaattgcacgtccacgaaatagatgtacaagccaaa
gatctgggtccgaactcgatccctgcccactgcaaagtgattgtcaatgtcatagacgtc
aatgacaacgcaccagaaatcaaactgttgtcagaaaacagtgaaatggtagaggtcagt
gagaacgcacctcttggatatgtgatagcactggtgagagtctcagacaacgattcggga
gcgaatggaaaagtgcagtgcagattgcagggcaatgtgcctttcagactcaacgaattt
gagagcttctccaccttacttgttgatggccgtctggatagggagcagagagatatgtac
aatttgaccattctagccgaggacagcggacatcccccgcttagaagctcaaaatcgttt
gcagttaaagtaacggatgaaaacgacaatcccccgtacttcaccaaaccacattatcaa
gccatggtcctcgaaaacaatgtcccaggtgcgtttctgctggcggtgtccgccagggac
ccagacctgggtatgaacggcaccgtgtcctacgaaatcatcaaatcggaggtgcggggg
atgtctgtggaatcgtacgttaccgtcaactccaacggtgaaatctatggggtcagggct
tttaatcacgaagatacgcggacctttgagtttaaagtctcagcaaaggatgggggagat
ccaccgttgaccagcaacgccaccgtgcgcatcgtcgtactggatgtaaacgacaacaca
cctgtgatgacaaccccgccgctggttaacggcaccgcggaggtatccattcccaaaaat
gctggagttggttatttggttactcaaataaaagccgatgattacgatgagggggaaaat
ggaaggttaacatattccatatcagagggagacatggcatactttgaaatagaccagata
aacggtgagatgcgaaccacaaagacgtttggggagaacgcgaagccatcctaccaaata
acagtagtggcgcacgaccacggccaaacttccttatctgcctctgcctatattgtcatt
tatctctcccctgatctgaatgcacaggagcaaattggacccgtcaacctgtcgctcatt
ttcatcattgcccttggttctattgctgtgatcctgtttgtcacaatgatctttgtggca
gtcaagtgcaaaagggataacaaggaaatccgaacatacaactgcagaaacctgatggag
gctttcagctctcccaacaggggggtggcggagtactcctacggcaaccagaagaagtcc
agcaagaagaagaagctgagcaagaacgacatccggctggtgccgagggacgtggaggag
acggacaagatgaatgtggtgagttgctcgtctctcacctcttcgctcaactacttcgac
taccaccagcagactctgccactgggctgcaggcgctccgagagcaccttcctcaacgtg
gagaaccagaactcaaggaatgctgtacccaaccatggctaccaccataccttcacaggg
cagggtcctcagcagcctgacctcatcatcaacggcatgccgctgcctgagacagagaat
tattccatcaactccagttatgtaaacagcagagcacatctaattaaaagcacgtcaaca
ttcaaggacatggaaggaaacagtctaaaggacagtgggcatgaggagagtgatcaaact
gacagtgaacatgatgttcagagagggcactatgccgacaccgctgtcaacgacgtactt
aatatgactgtacctccaaacaactcacagttacctgaccaagatcagtctgaggggttt
cactgccaagatgagtgtcgcatcctgggccactcggatcgctgctggatgcctcgcatg
ccaaagccggccagagcgaagtctcccgaacacggccgcaatgttattgctctatccatt
gaggccaccaccgtagatgtacctcattatgaggactgtggcaccaccaaaaggactttt
gccacctttggcaaagatgggccggacgaagagcggggcgaacagaggggcaggcggcaa
acagcagagccagccgtctgcagccccaagaccaacggtgccatccgcgaggctggaaac
ggtcgagaggctgtcagccccattacctcccctgtgcacctgaagagcccccagtctaag
ccaccctccacctacaacacgctgaagtgccgtgatgcagagcgcatagccaaccacagc
ctgctgcggcagccagagggaaaggacagtgagccggcaatgcgggagatcaacacgctc
ctgcaggacggccgtgagaaggagtcccctggcagtaaacgcctaaaggacattgtgctt
taa
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