Myxocyprinus asiaticus (Chinese sucker): 127413077
Help
Entry
127413077 CDS
T08782
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
masi04131
]
127413077
Membrane trafficking [BR:
masi04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
127413077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_2
TPR_8
TPR_10
TPR_MalT
TPR_7
SH3_2
SH3_9
HEAT_Nup120
TPR_NPHP3
ChAPs
Motif
Other DBs
NCBI-GeneID:
127413077
NCBI-ProteinID:
XP_051505884
LinkDB
All DBs
Position
22:21293764..21326127
Genome browser
AA seq
1454 aa
AA seq
DB search
MACCCCPVPCLRNCFLFSVISSAELDALWNDPPYTLAGDSEHFPPNDIMAADEEAEADAE
VEAESISRESYWRRKEAFSGSGTISSVGERFSPDVVLLFSGRRRSSVEPDGELQEKLRTR
LRVVESNSQDVVQLFKDMSARLVSVHAEKDSFVITFKTVEEIWKFSTYLALGYVARCLEN
FLCDQSFWLDPALLSDLEICVTVDEDHLATLYLGLLLQEGTFFSKALYNSDCRVEEEELT
YRRNDLVMVKDIGQEAMWEGTLLSKGQHGLVPVHAMQPLPYPFYQWFLKKYPGNAGGIPV
TEGLFNHPIVVGTCVAVVDHYPQVKDELHLCQGDLINIEGFLFNTLNVFIGRHLTTGEIG
FVHRANVKPERINPLNGQLVFLSEEERAVLSKLNPCAEPYQSDVLANLCSTDISTVYRLD
RLDDSDFAFIRNHPKSEQKTPVDQRNSTISEKSDTPPYHSSPRPSFHASRNHLERVPDVL
SFSLDDTFREMDEYEEDPANFMDDGIWEADEAERCDPILTLLNLEYFQDSFQTFYDLSYS
FLDTVFGGLPEDDALQHLENLREGAKKGRMLWAHRRACFLLGRLSAKKLKYSQARVYFEE
ALKVPVNGFDDQPLLIALYTNLTAVYLKQKMMDKLPLTLEKASALILCLPCHNFCSVDEF
ELLKPIMRQAIIEKDKYLEARTCYLSLYLFLHLRKIEDALPFVERLQFLTITLSAEEGRP
VAPVDLNWMLCRLYHKKYLPYLTLASLSLDSGQDQSLDDAFQKIELFIKNSVRLNPHWKE
STLILPAQVVVYLQQALTIASRGEDLKTQRDICLCLASVYQQHGALEKAVPFAQKAAQTG
NQINEEEGFEASVLLAWLLVLTDKCLQAQSTLHPLLKSLNETDSPTQRGVVYNLLALCLR
KQGRVKEAAKNFYCALQISRENGNKRNEALALANLGCLFLSVGASSLAECFLLNSLHLFQ
FLSESPTDEEHVQALLWLGRCYKDRGGSQEVRLCFEMGLLIAISAQNLHSQMVVAKVLSR
HYADLLLYGQCIVYYEHCVGLCRTLKNKQLEGEYLELLSNLYLSLNTEKSSRMSLDYSKQ
SLRISIDLGKRQEESETWLQVGRIYYLIYEDELTDMYLQAAVKTALKMNDPCFAMSIYEE
AGDVFFKGHRNRMAALPFYRDGSLPFARSIKDVHSEFRLLSKLTELLMKQKQYEEALQYA
TLAVQVSTTTGVPLNERVAFHRLASVYFSLGKYEMAENYYLKSLSFCPVLLEHAFELHYY
VKVYCRLADLTLYKLKDAFDAIGYFHLALAAALEDKESLSTLYIIYMKLAEIHANCMPDS
ELCKSYMASAKSLKRELAGYTESTDTEDKHQDHAKVDCAEVETFTHTKDGLLDSSSVTST
LTESSMTDTSLTITAQRESEHIPSNISHKEDLDTSFSEETDAGPPHHTILETSCTDNTNH
TNGSRLKEGMTFVI
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggcatgctgctgttgtcctgttccgtgcctcagaaactgcttcttgttttcagtgata
tcttctgctgagcttgatgccttatggaatgaccctccatacactttagcaggcgacagt
gagcactttccacccaatgacatcatggcagctgatgaggaagcagaggctgatgcagag
gtggaggcagaaagcataagcagagagagttactggagaaggaaggaggcattcagtgga
agtggtacaatatcttcagtgggggaacgcttttctccagatgttgttttgttgtttagt
gggaggcgacggtccagtgtagagcctgacggcgagcttcaggagaagttacgtaccaga
ctcagagtagtggagagcaacagccaggatgtcgtacagctcttcaaggatatgtctgca
cgactggtatctgttcatgctgagaaagacagctttgtcatcacctttaagacagttgag
gagatctggaaattctccacttacctagcactcggatatgtggcaagatgtcttgagaac
tttctctgtgaccagtcattctggctggaccctgcattgctaagtgatttagagatctgt
gtgacagtggatgaggatcacttagctactctttatctaggacttctgcttcaggaaggt
acatttttttccaaggctttatacaacagtgattgcagagtggaggaagaggagctgacc
tacaggaggaatgacctggtcatggtgaaagacataggacaggaggccatgtgggagggt
acgctgctgtccaagggccaacatggtctagtgcctgtgcatgctatgcagcctctgcct
tatcctttctatcagtggtttcttaagaaatatcctggaaatgcaggagggattccagtt
acagaaggtctctttaatcatcccatcgtggtgggtacctgtgtggcggtagtggaccat
tacccacaggttaaagatgagctgcacttatgccagggagatcttatcaatattgagggg
tttcttttcaatactctgaacgtgttcataggaagacacctcaccactggagaaatcgga
tttgttcacagggccaatgtaaaacctgagagaatcaaccctctaaatggacaattggtc
tttctgagtgaggaggaaagggcggtactgtctaaacttaacccctgtgctgagccctac
cagtctgatgtactggccaatctctgctccactgacataagcactgtgtacagattagat
agactggatgactctgattttgcgtttattagaaaccatccaaaatcagagcagaaaacc
ccagtggatcaaagaaacagcaccatatcagaaaagagtgacacacctccataccactcg
tccccacggccatcattccatgcctctcggaatcatctggagagggtccctgatgtcctc
tcctttagcctggacgacacgttccgagagatggatgaatatgaggaagatcctgcaaac
ttcatggatgatggtatctgggaagctgatgaagcagagaggtgtgacccaatcctgacc
ctccttaacctggaatacttccaggactccttccagactttttacgacctctcctactct
ttcctggacactgtctttggtggccttccagaagacgacgcgcttcagcatctggaaaat
ttgcgagaaggagctaagaaaggcaggatgctctgggcccatcggcgagcctgcttcctc
ctaggaaggctatctgccaagaaactgaaatactcacaggcgcgagtgtactttgaggag
gcattgaaggttccagtaaacggttttgatgaccaaccacttctgattgccctgtacacc
aatctcacagcggtatatctgaaacagaagatgatggacaagctgccattaacactggag
aaggccagtgctctgattctgtgtcttccatgccataacttctgctctgtggatgagttc
gagttgctcaaacccatcatgcgccaagccataatcgaaaaggacaagtacctagaggct
cggacttgctacctctcgctctatctctttctccatctaaggaaaatagaggatgctttg
ccttttgtggagaggcttcagttcctaaccatcactctgtctgcagaagaagggaggcct
gttgccccagtggatctcaactggatgctgtgcaggctttatcataaaaagtatttgccc
tatctcacactagcctctctaagtctagactcagggcaagaccaatccttggatgatgca
ttccagaaaattgaactctttatcaaaaattcagtaaggcttaatcctcactggaaggaa
agtactttgattcttcctgcacaggtggtggtctaccttcagcaggccttgacgatagct
agtcgtggagaagatctgaagacgcaaagggacatttgcctttgtctggctagtgtttac
cagcagcatggagctctagagaaggctgtgcccttcgcccagaaggcagcacagacagga
aaccaaatcaatgaagaagagggctttgaggcatccgtactgctggcctggctccttgtt
ctaacagacaaatgtttgcaagctcagtccactctgcatcctttgctaaagtctttgaat
gaaacagacagtccaacgcagcgtggtgtggtctacaacctcctagccctatgcctccgt
aaacagggcagagttaaggaggcggcaaagaacttttattgtgctctgcagatctccaga
gagaatggcaacaagcgtaatgaagcactagctctggcaaacctgggttgcttgttcctt
tctgtaggggcttcaagcctggcagagtgtttcctgctcaattccctccacctcttccag
tttctttcagagagtcctacagatgaggagcatgtccaggctctgctctggctgggcagg
tgttacaaggatagaggagggagtcaggaggtcaggctatgctttgagatgggcctcctt
attgctatcagtgcccaaaatctgcacagtcaaatggttgtggcaaaagttctaagtcga
cattacgctgacttgctgctgtatggacagtgtattgtttactatgagcactgtgtgggg
ctgtgcagaactctaaagaataaacagctagaaggagagtacctggagcttctcagcaac
ctctatctctcgctcaacactgagaaatcctcaagaatgtctcttgattactcaaagcaa
agtttaaggatctctatagatctggggaaaagacaggaagagtctgagacatggctgcag
gtgggccgtatctactatctaatctatgaggatgaactgactgacatgtaccttcaggca
gcagtaaagacagccctgaagatgaatgacccatgcttcgctatgagcatttatgaggag
gcaggagatgtctttttcaaaggacacaggaaccgcatggctgccctacctttttacagg
gatgggagtctgccatttgcacgcagcattaaggatgtgcactcagagttcaggctgctg
agtaaactcacagagctcctgatgaagcagaagcaatatgaggaggcactgcagtatgca
acactcgcagtgcaggtcagcaccacaactggtgttcctctgaatgagagagtggccttc
catcgtcttgcatcggtttacttttcattagggaagtatgagatggctgaaaactactac
ctgaagtctctttcattctgccccgttctacttgaacatgcttttgaacttcactactat
gtcaaagtctactgtagattggccgatctgacactatacaaattaaaggatgcattcgat
gccattggctatttccacttagccctggcagcagccctggaggacaaagaaagcctaagc
actctgtacatcatctacatgaagctggcagagatccatgccaactgcatgcctgattcg
gaactgtgtaaaagttacatggccagtgcaaagagtctaaagagggaactggccggttac
acagaatctactgacacagaagacaaacatcaggatcacgctaaggtagactgtgctgag
gtagagactttcactcacaccaaagatggccttttagactccagcagtgtcactagtact
ctcacagagtccagcatgacagacaccagcctcacaattactgcccagagggagtctgag
cacataccctcgaacatcagtcacaaagaagacttggacactagcttctcagaggaaaca
gatgcaggacctcctcatcacaccattctagagactagctgcactgacaacacaaaccac
actaacggaagtagattaaaagaaggcatgacatttgtaatatag
DBGET
integrated database retrieval system
