Myxocyprinus asiaticus (Chinese sucker): 127413078
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Entry
127413078 CDS
T08782
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127413078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
masi04121
]
127413078
Enzymes [BR:
masi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127413078
Ubiquitin system [BR:
masi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127413078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_11
zf-RING_2
PHD_NSD
zf_RING_Vps8
zf-UDP
zf-RING_Vps41
zf-ANAPC11
PHD
Motif
Other DBs
NCBI-GeneID:
127413078
NCBI-ProteinID:
XP_051505889
LinkDB
All DBs
Position
2:complement(18958766..18994460)
Genome browser
AA seq
705 aa
AA seq
DB search
MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEAVIRSDPRGIGSVVLGQVDSRLSPYIIDL
QSMHQFRQDTGTLRPVRRSFYDPRSAPGQGWVWEWENDSGSWTQYDTEVSIAIQAARDRQ
QPWLDLTPLGFCYLIDLQGMTQINGQTQRRRRIQRRSDLAYPLVSGPLPKPHAWSSAGSG
GLLGVGVSGVSGGNGSAYPSGALPASAITSLGQPCSCQQCMLVLGVKTPSMAQTLGRKPP
PAPKPPSPKVASRGHSYSLTLPHPPSLSRVLSPHRNSTSGAIGGFGHSLSFLGSATAALS
ISSNRPPPPAVPPPPPPSTTPYTTISPPNPSVPTPSNALISTATTCAPTPSARVLGPVST
ASAACAAPVPPRSSLAGLSRPALQRIAMAQSRALIASGVPTVPVKNLNGSSPVHPALAGI
TGILMSAAGLPVCLTRPPKLVLHPPPVSKSDIKPVPGLGHCCRKTTKKQARKGRTSEEVV
RRYLQKVRNPPEEDCTICMESLCGPSGYKGPSVGGISRVESVGRLSQCGHQYHLQCLVAM
YNNGNKDGSLQCPTCKTIYGVKTGNQPPGKMEYHVIPHSLPGHPDCKTIRLIYNIPPGIQ
GPEHPNPGKPFTARGFPRHCYLPDSEKGRLVLKLLLVAWDRRLIFSVGTSSTTGETDTVI
WNEVHHKTEFGSNLTGHGYPDSGHLDNVLEELRAQGITEEECMRD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgttgctagcctcggccgtggtcgtctgggaatggctgaacgagcacgggcgctggcga
ccctacagcccggcggtgtctcatcatattgaggcggtgatccgcagcgaccctcgcgga
atcgggagcgtggtgctgggccaggtcgactcacgtctatcgccgtacatcattgacctg
cagtctatgcaccagtttcggcaagataccggtacacttaggcccgtgcggcgaagtttc
tatgacccacggtcagcaccggggcagggttgggtgtgggagtgggagaatgactcaggc
tcatggactcaatatgacacagaggtaagcatcgcaatccaagcggctcgcgaccggcaa
cagccctggctagatttaacaccattgggcttctgctacctcatagacctgcaaggtatg
acgcagatcaatgggcagacacagcggcgcagacgaatccagagacgctcggacttggcc
tatccgctcgtctctggccctctgccaaagccccatgcgtggtcttctgctggaagtggt
ggactcctgggggttggagtatctggggttagtggagggaatggcagtgcctatccaagt
ggagctctcccggcttctgcaattacatcattaggtcaaccatgttcctgccaacagtgt
atgctagtcttgggtgtcaagacccctagtatggcacaaactcttgggcggaagccaccg
ccggcacccaaaccaccaagccccaaagtggcttcaaggggacactcgtactcgctcaca
ctccctcaccctccttccctttcccgagtactttccccacacaggaactccacctcgggt
gccattggaggctttggacactccctgtctttcctgggctcagccactgccgccctgtca
atatcctccaaccgtcctcctccacctgctgtaccgccacccccacctccttctaccaca
ccctacactactatttccccacccaacccaagtgtgcctacaccctccaacgcccttata
tctacagcgaccacctgcgctcccacgccctctgctcgtgttctgggtcccgtctcaaca
gcatcagcagcatgtgccgccccagtgccacctcgcagcagtctggctggccttagccgc
cccgccctccaaagaatcgccatggcacaatctcgggcgcttattgcatcaggagtccca
actgtcccagtgaagaacttaaatggatccagtcccgtccacccagctttggcaggtatc
actggtattctaatgagcgccgctggactcccggtctgcttgacccgcccacccaaactt
gtgctccaccctccacctgtcagcaagagtgatatcaaacctgtgcccggcctcggccac
tgctgtcgcaagaccacaaagaagcaggctcgcaaaggtagaacttcagaggaagtggtt
agaagatatctccagaaggtccgcaacccacctgaggaggattgtactatctgtatggag
tctctctgtggcccctctggctataaaggcccgagtgttggtggaatttctcgggtagag
tcagttggtcgtctgtctcagtgtggacatcagtaccacctgcaatgcctggtggccatg
tacaacaatggcaacaaggatggcagcctccagtgccccacctgcaagaccatctatggt
gttaaaacaggaaaccagccacctggcaagatggagtaccacgtcattcctcactcgctt
cctggacaccccgactgcaaaaccatccggcttatctacaacatcccccctggcattcag
ggtcctgagcatcccaaccccgggaagccctttacagcccgtggattcccgagacactgc
tacctccctgacagtgagaaaggccgcctagtgttgaagctcttgctggttgcatgggac
cgccggctgatcttctcagtgggcacgtccagcactacaggtgagacggatacagtcatt
tggaacgaggtgcatcataagaccgaattcggttccaacctgactggtcatggttaccct
gactccggtcacctcgacaatgtattggaggagttgagggcgcaaggcatcacagaggaa
gagtgtatgagggactga
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