Myxocyprinus asiaticus (Chinese sucker): 127413081
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Entry
127413081 CDS
T08782
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127413081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127413081
Enzymes [BR:
masi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
127413081
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127413081
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127413081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
E217_Gp32
Motif
Other DBs
NCBI-GeneID:
127413081
NCBI-ProteinID:
XP_051505890
LinkDB
All DBs
Position
22:complement(33495561..33516618)
Genome browser
AA seq
558 aa
AA seq
DB search
MPKEKYDPSDTRRMYTIMSSEEANSGKKSNWDALEITGNVRSLSSTLWSLTNLTALHISD
NCLSRIPPDIARLHNLVFLDLSSNKIRSLPAELGNMVSLRDLLLNNNQLRVLPFELGKLF
QLQTLGLKGNPLTQEIMSLYQEPDGTRRLLNYLLDNLAGAIKRIPTEQPPSRNWIVLEKP
DRTRPTALLTVMCYNVLCDKYATRQLYGYCPSWALNWSYRKKAIMQEILSCNADIVSLQE
VETEQYYNYFLVELNKQGYDGFFSPKSRARTMSESDRKHVDGCAIFYKTEKFSMVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELKEELMEVSSGKSLYGKEKQLLLVANA
HMHWDPEYSDVKLVQTMMFLSEVKNIIDKASHSLKLSAVSGETNVIPLVLCADLNSLPDS
GVVEYLSTGGVDCTHKDFKELRYIDSLTNFNCNGKNSTSNGRITHGFKLKSVYENGLMPY
TNYTFDFKGVIDYIFYSKPQLNVLGVLGPLDTDWLLENNISGCPHPHIPSDHFSLFAQLE
LVLPYPPSLNGVHLPGHR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggagaaatatgacccgtctgataccaggcggatgtacactattatgtctagt
gaggaggcaaacagtgggaaaaaatccaactgggatgcgcttgaaataactggtaatgtc
cgcagtcttagctcaaccctttggtctcttaccaacctcactgctctgcacatcagtgac
aactgtctttcacgcatcccacctgacattgccaggctgcacaaccttgtgttcttggat
ctatcatccaataagattaggagcctgccagcagagcttggcaacatggtgtctctcagg
gacctgcttttaaataacaaccagttgagggttctgccttttgaattggggaaactgttt
cagttacaaacactggggttaaaaggcaatccacttactcaagaaattatgagcctctac
caggagccagatggcactcgccgactgctgaactaccttttggacaatcttgctggtgct
atcaagcgcatcccaacagagcaacctccatccaggaactggattgtgctggagaagcct
gataggacaagaccaacagcccttttaacagtaatgtgctacaatgtgctgtgtgataag
tatgccacacgccagctctacggctactgcccgtcctgggcccttaactggagctacagg
aaaaaggctattatgcaggagatcctcagctgcaatgcagacattgtcagcttacaggaa
gtggagacagaacagtattacaactacttccttgtggagctgaataaacagggatatgat
ggatttttcagcccaaagtcccgcgccagaaccatgtctgaatcagacagaaaacatgta
gatggatgtgcaatattctacaagactgaaaagttcagcatggtgcagaaacacacagtg
gagtttaaccagctggctatggccaattcagagggctcggaggctatgttaaatcgggtc
atgaccaaggacaacatcggggtggctgtgttgctggagctaaaggaggagttaatggag
gtgtcatcaggtaagtctctttatggcaaggagaaacagctcctactagtggcgaatgct
cacatgcactgggacccagagtactctgatgtgaagttggtgcagactatgatgttcctg
tcagaagtgaagaatatcatagacaaggcttctcacagtctgaagctctctgctgtgtca
ggagaaaccaatgtcattcctctggtgctgtgtgccgatctcaactcacttcctgactca
ggtgtagtggagtacctgagcacaggtggggtggattgtacacataaagacttcaaggag
ctgcgctacattgacagcctgactaacttcaactgcaatggcaagaacagcacgtctaat
ggacggatcacgcatggttttaagctgaagagtgtctatgagaatgggctcatgccctac
accaattacacttttgacttcaagggtgtcattgactacatcttctattctaagccacaa
ctgaatgtgctgggtgtcctgggacccttggatacagactggctcctggagaacaatatc
agtggttgcccacacccccacatcccctccgatcacttctccctgtttgcacagctggag
ttggtcctgccttaccctccctctctcaacggagttcacttacctggacacaggtag
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