Myxocyprinus asiaticus (Chinese sucker): 127413199
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Entry
127413199 CDS
T08782
Symbol
si:ch73-233f7.1
Name
(RefSeq) protocadherin beta-15
KO
K16499
protocadherin delta 2
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
masi04515
]
127413199 (si:ch73-233f7.1)
Cell adhesion molecules [BR:
masi04515
]
Cadherins
Protocadherins
127413199 (si:ch73-233f7.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
127413199
NCBI-ProteinID:
XP_051506042
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All DBs
Position
22:2364802..2374377
Genome browser
AA seq
1009 aa
AA seq
DB search
MDRRLPKRRWTLAGQVVCLLLCACALDRVLAQIRYSIPEELEHGAFVGNIAEDLGLDVAK
LSSRRFRIVSGERKQYLEVNLENGILFVNEKIDREELCEQSPVCFLHLQVVIENPLELYR
VEVEILDVNDNAPSFPWSEFNLEVTESAAPGSRFPLESAQDLDVGSNSLRSYLLSANQHF
VLDIQTRNDGSKFAELVLQSPLDREQQKTHEMVLTAVDGGSPLRSGTAQITVTVLDANDN
VPVFDRSVYRVSLVENAPRGTLVLKLNATDLDEGVNGEITYSFSGHAPLKVRELFNVDSH
SGEIRVKGIVDYEKASVYELYVQAKDKGPSAVAVHCKVLIDILDVNDNAPEVILTSVSTP
VQEDAPPGTVIAVISVMDRDSGENGAVDCQIPGNVPFQLHSSFRNYYTLVTSEFLDRESV
SEYNITLTARDLGSPPLSTRKTILVQVSDINDNPPRFIQPSYTVYVTENNAPGASICSVT
AFDPDSTQNAYLSYSILEGQIQGMPVSTYVSINSDNGNIYALRSFDYEQLRNFQIRVQAQ
DAGFPPLSSNVTVNVFVLDQNDNAPVILSPLPKNGTIATDMVPRSVDAGYLVAKITALDA
DAGQNSRLSFQVLQATDPGLFSVALYTGEIRTIRRFVDKDAIRQRLVILVKDNGQPPLSA
TVSIILSVVDSVPESLSDFGDLSLSHQPPSNLALYLIVSLSTVSLIFLVAIIVLAAVKCY
KDRDSLSGYALSSLGATCCSFEPEPSAEVFKKSNVNLQISSGAKVPTNCAEVNSNPGNLS
QAYCYKVCLTPESAKSDFMFLKPCSPGTPRNNAARGTDNLALSSQSRCSSVNNGATTPNE
LKQANTDWALTKNQTSSVKSCNSLNMDGTLIRKAMQAEPETYMTPVAAGQYWTWGNRSRE
YQMHSPAGVSQRAWTPHYTPTHNPTRHSQQQQQPTAQVHPHPPPDYQHNVYIPGTPSGFC
TLRPIYRSELDVHNSFSTFGKKRRLISPSSYDPHDDMGMEVINNDLYNE
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggaccggaggcttccgaagaggcgatggacgttggcagggcaggttgtgtgtctgctc
ctgtgtgcgtgcgccctggaccgggttttggcgcagattcggtattccattccagaggag
ttggagcacggggcttttgttggaaatatcgccgaggacttgggcttggacgtggccaaa
ttgtcttcaaggagattccggattgtgtccggggaaagaaaacaatatttagaggtgaat
ttggaaaacggaattttgttcgtgaatgagaagattgatcgcgaggaactgtgtgaacaa
agtcccgtttgtttcttgcacttacaagtcgtaattgaaaaccctttggaactgtaccgg
gtagaggttgaaattttggacgtgaatgataacgcgcccagtttcccgtggagcgagttt
aatctggaggtcacggagtctgctgcgccgggctcccggttccccctggagagcgcccag
gacctggatgtgggctcgaactctctccgctcctacctgctgagcgcaaatcaacacttc
gtgctggacattcaaacgcgtaacgacggaagcaaattcgctgaacttgtgctgcagtcg
ccgttagaccgagagcagcagaagacgcacgagatggtgctcacggccgtggacggcggc
tctcctttgcgctcgggcaccgctcagattacggtcactgtgctggatgccaacgataac
gtaccggtgttcgaccgctccgtataccgggtcagcttggtggagaacgcaccgagaggc
acgctcgtgctcaaactgaacgctacggacctggacgagggcgtaaacggtgagattacc
tattcgttcagcgggcacgcgcctctgaaggtgcgggagctgttcaacgtggactctcac
tcgggtgagattagggtgaagggtatagtggactacgaaaaggccagcgtgtacgagctc
tacgtacaggcgaaagacaagggtccctccgccgtggccgtgcactgtaaagtactgatc
gatattctggacgtgaacgacaatgcgcccgaggtcatattaacctctgtgtcaacacct
gttcaggaggacgctccaccgggcacggtgatagccgtgatcagcgtaatggaccgcgac
tcgggtgaaaacggggctgtggattgccagattcccgggaacgtgccgtttcagctgcac
tcctcttttagaaactattacacacttgtaacgagcgagtttctggacagagagtccgtc
tcggagtacaacatcacactcacggcgcgagatctgggctcgccgccgctgtccaccagg
aagacgattctggttcaagtgtctgacattaatgacaacccaccgcgcttcattcagccc
tcatacactgtatatgtgaccgagaataacgccccgggcgcatccatttgctcggtgacc
gcattcgatccggactctactcaaaacgcgtatttgtcctactccattctggagggtcag
atccagggcatgcccgtgtccacttatgtatccattaactccgataacggcaacatctac
gcgctgcgctctttcgattacgagcagctccggaactttcagatccgcgtacaggctcag
gatgccggtttcccgccgctcagcagcaacgtgactgtcaatgtttttgttttggatcag
aatgataacgcaccggtcatcctgtccccgctaccgaaaaacggcaccatagccactgac
atggtgcccaggtcggtggacgctgggtacctcgtggcaaaaatcactgcgctagacgcg
gacgcggggcaaaactctcgcctctcatttcaggtgcttcaggcgacggatcccggactg
ttcagcgtcgctctgtacaccggcgagatcaggacgatccgacgtttcgtggacaaagat
gccattaggcaaagacttgtcatactcgtcaaggacaacgggcagccgccgctctcggcc
accgtgtccatcattttgtcggtggtggacagcgtgccggagtcgctgtccgatttcggt
gacctctcgctcagccaccaacccccttctaacctcgcgctctatttaattgtgtcacta
agcaccgtctcgctcatcttcctcgtagctatcatcgttctggcggccgtgaaatgctac
aaggaccgcgactctctcagcggttatgcactctcctcgctcggcgccacttgctgcagc
tttgaaccggagccgtccgccgaggtgttcaaaaagtccaacgtcaacctgcagatctcc
agcggcgcgaaagtgcccacgaactgcgcggaggtaaacagcaatcctggaaatctctct
caagcttactgctacaaagtgtgtttaacgcccgaatctgcaaagagcgactttatgttt
ctcaagccttgcagtcccggtacaccgaggaataacgcggcgaggggaacggataacctg
gcgctgagctcacagagccgctgctcatccgtgaacaacggagcgactacgccgaatgag
ctgaagcaagcaaatactgactgggccctcaccaaaaaccaaacctcctctgtgaaaagc
tgtaactctttaaacatggatggcactctgatccgtaaggccatgcaggctgaaccagag
acttatatgactccagtggctgcaggacagtactggacctggggaaaccgatcgagagag
taccagatgcattctccagcaggtgtttctcagagggcgtggactcctcattacaccccc
acacacaaccccacccgccattcgcaacagcagcagcagcccacagcgcaggtacacccg
catcctccacccgattaccagcacaacgtctacatccccggcacaccctccggcttctgc
acgctgcgtcccatttaccgcagcgagcttgacgtccacaattccttctccaccttcggc
aagaaacgcaggttaatctcgcccagcagctatgaccctcatgacgacatggggatggag
gttatcaacaatgacttgtataacgaatag
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