Myxocyprinus asiaticus (Chinese sucker): 127413829
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Entry
127413829 CDS
T08782
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM8-like
KO
K12001
tripartite motif-containing protein 8 [EC:
2.3.2.27
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
masi04121
]
127413829
Enzymes [BR:
masi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127413829
Ubiquitin system [BR:
masi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127413829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
TRIM_CC
zf-RING_2
zf-RING_5
zf-RING_6
U-box
RING_XB3-XBAT31
DUF3287
FliD_C
Motif
Other DBs
NCBI-GeneID:
127413829
NCBI-ProteinID:
XP_051507238
LinkDB
All DBs
Position
23:complement(18659468..18691299)
Genome browser
AA seq
566 aa
AA seq
DB search
MSDQLVEMAENWRNCFEEELICPICLHVFVEPVQLPCKHNFCRECISEAWAKDAANVRCP
ECNHAYNQKPNLEKNIKLNNIVEKFNALNVEKSTAVLHCILCRRGPPLQAQKVCLRCNAP
CCQSHVQTHLQQPCPAPGHLLVAAEEVRAWSCPHHDEYRLYHCDVEQVSVCQYCYFSRCA
TNHGNAVCDVEVRRNEIRHMLMKQQDRIDDRVKDIEEQLYKLESDKLLVEDKVRQLKEEV
RVQYHKMHQLLEDDLGRTLEVLDKAHSKYCQENSTQTLQLNERRQEAKKLLSSVQVVFDK
AEDINFMKSTKPVKILMDRSQSCTGSVLPPYKVGHLNSKIFLSEVSKKEKNLRKLLEAPF
NTSAHFLQSVSVHPSSVNNYGGEKRKHSKAFPESCTSLLDSSSGPMSKQPFLGQGSNSTD
GPSSQPPMAPCSSTQHIVGLSSSSGAQSVHHSRSVFTPADYPNASSSQQAMLPQYGGRKI
LMCTMDNCYCSSVPSISNHRGHAPYPRSGSFPWTQDYSHPLPSTPAMSQPLQGLSMHDWI
DASQSHRHPDFYGLYGQSSTKPYVTS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatcaactggttgagatggctgagaactggcgaaactgctttgaggaggaactc
atttgccctatatgtttgcatgtgttcgtggagcccgtgcagctgccttgcaaacacaac
ttctgccgagaatgcatcagtgaggcctgggcgaaagacgcggccaatgtgcgctgtccg
gagtgcaaccacgcatacaaccagaaaccaaatctggagaaaaacatcaagctgaacaac
atcgtggagaagtttaacgcgctgaacgtcgagaaatcaacagccgtactgcattgcatt
ctgtgtaggcgaggacctcctcttcaagcacagaaagtgtgtcttcgatgtaatgcaccg
tgttgtcagtctcatgttcagacacatcttcagcaaccctgtcccgctcctggccattta
ctagtggcggctgaggaggtcagggcatggagctgtccacaccatgatgaatacagactc
tatcattgcgatgtggaacaggtgtctgtctgccaatattgttacttctctagatgtgcg
accaaccacggcaatgcagtttgcgacgtggaggtacgacgcaatgagatcaggcatatg
ttgatgaagcagcaggatcgtattgatgatcgagtgaaagacattgaggagcagctgtat
aagttagagtctgataaattactggtggaggataaggtacggcagctgaaggaggaggtg
cgtgtgcagtatcacaaaatgcaccagctcttagaagatgacctggggagaactctggaa
gtgctggataaagcacactcaaagtactgccaagagaattccacccaaaccctacagctc
aatgaacgtcgccaggaggccaagaaactgctcagctctgtccaagttgtgtttgacaag
gcagaggatattaacttcatgaagagcacaaaaccagtgaaaatactcatggatagatca
caatcatgcacaggcagcgttctgcctccttataaagtgggtcatcttaattccaaaata
ttcctctctgaagtctcaaaaaaggaaaagaacttgagaaaattactggaagcaccattc
aatacttctgcacacttcctccagagcgtttctgtccacccctccagtgtgaataactat
gggggtgagaaacgcaaacactccaaggccttcccagaaagctgcaccagcctgctagac
tcctcatcaggccccatgagtaaacagcccttcctgggtcaaggctccaactccacagat
gggccctcctcccagccacccatggctccctgtagctccacccagcacattgtaggcctc
agtagtagcagtggcgctcagtcggtccatcattccagatctgtttttactcctgccgac
tatcccaatgctagctcgtcccagcaggccatgctgccgcaatatggcggccgtaagatt
cttatgtgcacgatggacaattgctactgctctagcgtaccctccatatcaaaccatcgt
ggccatgctccttacccacgctctggatctttcccatggacacaggattactcccacccc
ctgccctccacacccgcaatgtcccagcccctccaggggctctccatgcatgactggatc
gatgcctcacagagtcacaggcaccctgacttctatggattgtatgggcaatcttccact
aaaccttatgttaccagttaa
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