Myxocyprinus asiaticus (Chinese sucker): 127415013
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Entry
127415013 CDS
T08782
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
masi01009
]
127415013
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127415013
04131 Membrane trafficking [BR:
masi04131
]
127415013
03036 Chromosome and associated proteins [BR:
masi03036
]
127415013
Enzymes [BR:
masi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
127415013
Protein phosphatases and associated proteins [BR:
masi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127415013
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
127415013
Membrane trafficking [BR:
masi04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
127415013
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
127415013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
127415013
NCBI-ProteinID:
XP_051509421
LinkDB
All DBs
Position
24:complement(5952820..5988589)
Genome browser
AA seq
1106 aa
AA seq
DB search
MDPEPDLSDSKTSKGSTRTPENRNKRENSKPNHKKSLQEARRKGRMDRSKAEEEISNELQ
NLDVHGKTKAAGTGLVYIDALTQYHCLWDASHPECPERVSTVMDTLNREGLLARCVRVET
RAVSEEELLLAHTKEYVELMKSTQKMSEEELKTLANKYDSVYLHPESFSSACLAAGSVLQ
LVDKVMTSQLRNGFSVARPPGHHAHTDQMNGYCMFNNLAIAARYAQKRHGIERVLIVDWD
VHHGQGIQYIFEEDPSVLYFSVHRYEEGSFWPHLKESDSTSVGLGAGQGYNINLPWNKIG
MEDGDYVTAFQQLLLPVAYEFHPQLVLVAAGFDSVIGDPKGEMRASPQCFSVLTHMLKGL
AQGRLVLALEGGYNLQSTAEGVCASVRSLLGDPCPHLTSPGAPSESALKSISKTISALYP
FWKSLQTFEGGPLSDATPLPAPVCSEVQVSSPITGLVYDQKMMLHHNMWDSHHPELPQRI
SRIFARHKELGLVSRCHRIPARLATEEELALCHSLVHISAIKGTEHMKSRDLHRVGNEYN
SIYISNESYNCALLAAGSCFNSVQAILMGQVRNGVAIVRPPGHHAEKDKACGFCFFNTAA
LTARYAQSITYKSLRVLILDWDVHHGNGTQHIFEEDDSVLYISLHRYEDGTFFPNSEDAN
YDKVGQGKGTGYNVNIPWNGGKMGDPEYFAAFHHLVMPIAREFAPELVLVSAGFDAARGD
PLGGYQVTPEGYAHLTHQLMSLAAGRLLVILEGGYNLASISESMCMCTSMLLGEAPPTLS
HLPPPHHKATVTINNVLRAHAPFWRSLRIQIPESLRLSLPSPKPKGKRVSAGKSKKSPRQ
STPVKSPGQIPQHHTSPEDLAPPTATHEQSVLDDLAQGLLSLDLNTSTSSNRSPASVLVG
GARRKVKSNPQRNSTGQEADSPQKLMSEKAKGDGANAEVTPIKAETPSIPESVVMGNSAP
IDDQKCSAQEGACGYTEKSVYELVCGAQDMDGETMYVVDPLSWCPHLKSARPVPAGGIDV
FLPCEECGGDAENWICLFCYKVLCGRYVNQHMVTHGQVSGHPLVLSFADLSVWCYACESY
IHNKVLHEAKNAAHLMKFGEEIPPFN
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgaaccagacttgagtgactcaaaaacctctaaaggttccactcgaacacca
gagaacagaaacaaaagagaaaacagcaagccgaaccataaaaagagtctgcaggaggca
cggaggaagggcagaatggatcggagtaaagcagaggaggagatcagcaatgaactccaa
aacctggatgtgcatggtaagactaaagcagcagggacaggtctcgtttatatagatgct
ttgactcaatatcactgcctctgggatgccagtcacccagagtgtccggagagagtgagc
actgtcatggacacactgaatagggagggtttgctggcacgctgtgtacgagtcgagacc
agagctgtgtcagaagaggaattgttactcgctcacacgaaggagtatgtagaactcatg
aaatctacacagaaaatgtcagaagaggaactgaagactctcgctaataaatatgactct
gtctacttgcatcctgaatctttcagctctgcctgtctggcggcaggatcagttctccag
ttggtggataaggtgatgacttcacagctgcgaaatggcttctctgtagcaaggcctcca
ggtcaccatgctcatacagatcagatgaatggctactgtatgtttaataatctggccatc
gcagcacgttatgctcagaaacggcatggaattgagcgagttctgatagtggattgggat
gtgcatcacggacaaggaatccagtatatttttgaagaggatcccagtgtgttgtatttc
tcagtgcacagatatgaagaaggctcgttctggccgcatctcaaagaatctgacagcact
tctgtgggtttaggagcgggtcagggctacaacataaacctgccctggaacaagataggg
atggaggatggagattatgtcacagccttccagcagcttctccttcctgtggcgtatgag
tttcatcctcagctggtgttggtggcagcaggctttgactcggtgatcggtgacccaaag
ggtgagatgcgagcgagtccacagtgtttctccgtcctgacgcacatgttgaaaggtctt
gcccagggccgacttgtactggctctggagggtggatataatctccagtccactgcagag
ggtgtttgtgccagtgtgaggtcactcctgggtgacccctgccctcacctgacctctcca
ggtgccccaagcgagagtgctttaaagtcaatttcaaagaccatctcagctttgtatcca
ttttggaagagtcttcagacttttgaggggggtcctctgtccgatgccactcctctaccg
gcaccagtatgttctgaagtgcaagtttcctctccaattactggacttgtttacgaccag
aaaatgatgcttcatcacaacatgtgggacagccatcacccagagctccctcagaggatc
tccagaatctttgcccgccacaaggaattggggctagtgtctcgttgccatcggatacca
gctcgcctggcaacagaagaagagttggcgctgtgccacagtctggtgcatataagcgct
attaagggcacagaacacatgaaatccagagatctgcaccgcgtagggaacgagtacaac
tccatctacatcagtaacgagagctataactgtgctctgctcgccgctggatcgtgtttc
aactccgtacaggccatactcatgggccaggtgagaaatggtgtggctatagtccgccct
cctggtcaccatgcagagaaagacaaggcgtgtggattctgtttctttaacacggctgct
ttaacagcacgctacgcccaaagcatcacatacaaatccctgcgcgtcctcatcctcgac
tgggacgttcaccatggaaatggcacacagcacatctttgaggaggatgacagtgttctg
tacatctctctgcatcgctatgaagacgggaccttcttccccaactcagaggatgctaac
tatgataaggtgggacaggggaaaggcacaggctacaatgtcaacatcccctggaatgga
gggaagatgggagacccggaatactttgcggcattccatcatttagtgatgccaatagcc
agagagtttgcaccagagctggtgctggtgtctgctgggttcgatgcagcacggggtgat
ccattaggagggtatcaagtcaccccagagggctacgcccacctcactcaccagttaatg
agtctggctgcaggcagattgcttgtcatactggagggaggatataacctcgcctccatt
tctgaatccatgtgcatgtgtaccagtatgttgctgggagaagcccctcccactttgtcc
catttgccccctccccaccacaaagcaactgtcaccatcaacaacgtcctgcgtgctcac
gcccccttctggagatccctgagaatacagattccagagtcactccgtttgtctttgcca
tctcctaaaccaaaaggcaagcgggtgtcggctggcaagagcaaaaaatctcctcgccaa
tccacccccgtcaaaagtcccggtcaaataccgcagcatcacacctccccagaggatttg
gctccacccactgccacccacgagcagtccgtcctagatgaccttgctcaaggcctgctc
tctctggatctcaacacaagtacctcatctaaccgcagcccagcctcagttctagtggga
ggagcaagacgcaaggtgaaatccaacccgcagaggaattcgacaggtcaggaagcagat
tcaccacaaaaactgatgtcagagaaagccaaaggagatggtgcaaatgcagaggtcacg
cccataaaagcagagacaccatcaatccctgagtctgtggtcatgggaaattcggctcct
attgatgaccagaagtgttctgcacaagagggggcttgtggttacactgagaaatcagtg
tatgagcttgtctgtggagcacaagacatggatggggagacgatgtacgtggtggacccg
ttgtcctggtgcccacacttgaagtcagcgcggccagtgcctgcaggtggtatcgatgtc
ttcctaccgtgtgaagagtgcggaggtgatgctgagaactggatctgcctcttctgctac
aaggtgctctgcgggcgatatgtaaaccaacatatggtgacccacgggcaggtgtcgggt
caccctctggtgctgagcttcgctgacctttctgtctggtgctacgcctgtgagtcatac
atccacaacaaggtgctccatgaagccaaaaatgctgcccatctcatgaagtttggagaa
gagattcctccattcaactga
DBGET
integrated database retrieval system
