Myxocyprinus asiaticus (Chinese sucker): 127415268
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Entry
127415268 CDS
T08782
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127415268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
masi03009
]
127415268
Ribosome biogenesis [BR:
masi03009
]
Eukaryotic type
Pre-60S particles
RNases
127415268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
127415268
NCBI-ProteinID:
XP_051509910
LinkDB
All DBs
Position
24:16188005..16209084
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AA seq
1248 aa
AA seq
DB search
MLRSTGFFRGIDCPFYCDKGKAGRDECSRPYCHFRHSKQRRASSGKYDIRKTKALSASPN
EKGYDPFSPEVVRSGEHYNVEPSSSLSAGQDVDLGTIELELVNRAIEAVRSEMERDKKKL
SQIGDQEYEPTTSSVKRHRPTAASSHQGYDPGSYQMGQATEYNPTPRSNKYTLDSENCSS
NANALEYVPTTVSKAKVKKVLPPPPTVSTSSVKCKYTLDNSKPSTDMEYDPLSNYSAKLT
VKERRTLCSEGERRKRFHHAEREKQSQDEEYVPTVKKPRSLPPKADVPKYTASFSESDEE
SSGTEYRPTSISRLRLKGIQTVLKQERESVDANAGTLRQQRKQDSRTEDVISLSESEDFE
SQELDRTSKKVVKKKTEKTEKSVQLKSNKSEKLKKEEKDSSKKSNSHKERQGSSSGEKTS
KNSGKDNMKKDKIQGKNVEVSSKSKEKYSEKVRKQSTEAKNSVDKNKSGKVKSDQSKKEK
DKSSDSKKPRTDKPMKTVKELSKSKDNKNGKLETSGKEKEKKKSSHGSNSSSNKEKSKKN
SSASNQKEARETKQRNLSHVDLFGAESAEEEDEEDERIVRKSASAFKRGSVMNNKRKTSE
VTSSSSEDDYEADDGGGDDDVGVDYSSLQAEMEYDSDPMEECLRIFNESKEVKMEDKGRQ
AKQPSQEQEEEGEDTESTLSSLFPGQKKRVSHFQAQGKSETSLNAVPMPHRRVTAQEICF
QRMQKAQQQAAQLAAAVKTASASTKPVLGLSGAKQRVAHRPNTSLPSSKPGLANSSKQVL
SPTTSATDQIPVKAHTSAGILSKTVSTTVQKRVAHTPTLKSPTMNRPVIPAEFGAKVPTN
VRQRYLNIFIDECLKFCPSEQEAFQTALEEEKVVYDRSSSKNIYLNVAVNTLKKLRSKTT
PVSPAIKSPAVSVNRKAQSHEGVLGGRLAATTSFTINRSGKQQDMDLKGAILYMKLKSYL
MTEEQLEEHGYPRPHPEISGHAVVHNLPEKKNNDPFSKVCCRCGAEYKINANGSCVRKEE
CSHHWGRLRRNRVPGGWETLYNCCSGAVGSPGCEVSKQHVQDGRKESLDGYVKTFSKRLP
VDGNGGVYALDCEMCYTKQGLELTRVTVINSELKVVYDTFVKPASKVVDYNTRFSGVTQD
DLENTTITLRDVQAVLLSMFNAESILIGHSLESDLFALKLIHSMVVDTAIVFPHRLGLPY
KRALRNLMAEYLKQIIQDNVGGHDSSEDARACMELMIWKIKEDAKVKR
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgttgagatctaccgggttcttccgtggcattgactgcccgttttattgtgataaaggg
aaagccggtagagatgagtgcagcagaccctactgtcacttcaggcacagcaaacaaaga
cgagcctcctctgggaaatacgatatcagaaagactaaagcgctttcggcgagtccaaac
gaaaaaggttatgatccattcagtccggaggttgtaagatcaggagagcattataatgtg
gagccatcatcaagcctgtcggcgggtcaggatgtggacctgggcaccattgagctggaa
ctggtcaatagggccattgaagctgttcgcagcgaaatggagagggacaagaagaaactc
tctcagattggagaccaggaatatgagcccaccactagttctgttaagagacatagaccc
actgctgcatcgtcccatcagggctacgatcctggaagctatcaaatgggacaagcaact
gaatacaaccctaccccacgctccaataaatacactttagactctgagaactgcagtagt
aatgcaaacgcgctggagtacgtgccgactactgtctccaaagcaaaagttaaaaaggtg
ttacccccaccacctactgtcagcaccagttctgtcaagtgtaaatacacgctggataat
tccaaaccctccacggatatggagtacgacccactctcaaactactccgctaagctgact
gttaaagaacggaggactttgtgttcagaaggagagaggagaaagagatttcaccacgca
gaaagggaaaaacaatcgcaggatgaggagtatgttccaacggtaaagaaaccaaggtca
ttgccgccaaaggccgacgtcccaaaatacaccgctagtttttctgaatctgatgaggaa
agttccgggacagagtatcgtccgacgtccataagccgactgcggctcaaggggatccaa
acagtcttgaaacaagaaagagagtcagttgatgcaaatgctggtacattgagacaacaa
aggaagcaggactctagaacagaggatgtcatttcactgagtgaatcggaagattttgag
tcccaggagctggacaggacaagtaaaaaggtagttaaaaaaaagactgaaaagactgaa
aaaagtgtccagttgaaaagtaacaaatccgaaaaactgaaaaaagaggagaaagactca
agtaaaaaaagtaacagtcacaaagaaagacaaggaagttctagtggggaaaagacatca
aagaattcaggtaaagacaatatgaaaaaagacaagatccaaggtaagaatgtagaagta
agcagtaaatctaaagaaaagtattcggaaaaggtgcggaaacaaagtactgaggcaaaa
aacagtgttgacaagaacaagtcagggaaggtgaaaagcgaccagagcaaaaaggaaaaa
gataaaagtagcgattccaagaagcctagaacagacaagcccatgaaaacggtcaaggaa
ttgtccaaatccaaagacaacaagaacggaaaacttgagaccagtggaaaggagaaggag
aaaaagaagagcagtcatggcagcaatagcagtagcaataaagagaaaagtaaaaaaaac
agctcagcctccaatcaaaaagaggcaagagagaccaaacagaggaatctaagccacgtg
gatttgtttggtgccgagagtgctgaagaggaagatgaggaagacgagaggatagtgagg
aagtcggcttctgcttttaaacggggaagtgttatgaataataagaggaaaacctcagaa
gttacatcttcatcatcagaggatgattatgaggctgatgatggtggtggagatgatgat
gtaggagtggactactccagcctgcaggctgagatggagtatgattctgacccgatggag
gagtgtctgcggatatttaatgaatccaaagaggtgaagatggaagataaagggagacaa
gccaagcagccttcacaggagcaggaggaggagggggaagacacagaaagcactttatct
tctctctttcctggccagaagaagagggtgtcacattttcaagctcaaggaaaatcggag
acatcactgaatgctgtaccgatgccacatcggagggtgactgcgcaggagatctgtttc
cagcgtatgcagaaggcccagcagcaggcggcacagctggctgctgcagtaaagactgcg
tctgcttccaccaaaccagttcttgggctctctggagcaaaacagagggtggcacaccgg
ccaaatacctccctgccctcttcaaagcctggcctagctaattccagcaaacaggtgttg
tcacccaccacatcggcgacagatcagattcctgtgaaagctcatacatcagctggcatc
ctttcaaagaccgtatccactacagtgcagaagagagtggctcacacccctacactcaag
agccctactatgaatcgtcctgtcattcccgctgaatttggggcaaaggttcccactaat
gttcgccagcgttatctcaacatcttcatagacgagtgtctgaagttctgtccctctgaa
caagaagcttttcagacggctctggaggaggagaaggtggtatatgacagaagcagcagt
aagaacatttacctgaatgtagctgtgaacacactgaagaagctccgcagcaagaccaca
cctgtatctcctgccatcaagagtccagcagtatctgtgaatagaaaggctcagtcccat
gaaggagttcttggtggtcgacttgctgctacaaccagcttcaccatcaaccgctctggc
aaacagcaagatatggaccttaaaggtgccattctttacatgaaattgaagagttacctt
atgacggaggaacagctggaggagcatggctaccccagacctcatcccgagatctcgggt
catgctgtagtccataacctcccagaaaagaagaataatgaccctttttccaaagtgtgt
tgcagatgtggtgctgagtacaagataaacgctaatggcagctgtgtgcgtaaggaggag
tgcagtcaccactggggaagattacgcagaaacagagtgccgggaggttgggaaacactt
tataactgctgttctggtgcggttggttctcctggatgtgaagtgtctaaacaacacgta
caagatgggcggaaagaatctttagatggttatgtgaagacttttagcaaacggctacct
gtagatgggaacggaggtgtatacgccttggactgtgagatgtgctacacaaaacaaggg
ttggagctgaccagggtgactgtcattaattctgagctcaaggtcgtgtatgatacgttt
gtcaagccggcgagcaaagtagtggattacaacacacggttctcgggtgtgacgcaggat
gatctggagaacaccaccatcaccctgagagacgtgcaggcagtgctactgagcatgttc
aatgctgaatccattctgattggacacagtctggagagtgacctgtttgcccttaagctt
attcacagcatggtcgtggacacggctattgtgtttcctcatcgcctgggtctgccttac
aaacgggccctacgaaaccttatggccgaatacctcaaacaaatcatacaggacaacgtg
ggggggcatgactccagtgaggatgcacgggcctgcatggagctcatgatctggaagatc
aaagaggatgcaaaggtgaagagatga
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