Myxocyprinus asiaticus (Chinese sucker): 127415443
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Entry
127415443 CDS
T08782
Name
(RefSeq) intermembrane lipid transfer protein VPS13A-like isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
masi04131
]
127415443
Membrane trafficking [BR:
masi04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
127415443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
ATG2_CAD
RRM_fung
Motif
Other DBs
NCBI-GeneID:
127415443
NCBI-ProteinID:
XP_051510126
LinkDB
All DBs
Position
24:36840440..36922057
Genome browser
AA seq
3228 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDSSQLSLGIWGGDAILRNLEIKENALSQLDIPFKVRAG
HIGCLELKIPWKNLYAQSVEATLDEVYLLIVPTASIKYDAEKEDRQLQEARQRELQRIEE
TKQKAAEKENPKAEKQDTFVEKLVTQVIKNLQVKISNIHVRYEDDVTNPNAPLSFGVSLQ
NLSLQTADQNWNPCLLDEKAKLFFKLVRLDSLFAYWNVNSELYSNHSPDEALRCLKHSVD
VKNSIPQDYHFIFRPISANAKLRMNPRSEVDFSSPKVDLVVNLPEVAVELSRPQYVSILE
LLGSVDMMTRNLPYRKYRPYVPVHTNAHRWWRYVITGVLEVNIKPSLHMWSWEHIRRHRQ
HVKKYRELYKNKITTKKPGEGLLKELEETEKTLDIFNITMARQQAEMEASKAGLRICRPG
VKVEEEQSQGWFGWMWNWSGDSGTQNKDIKTGGFDELMTPAEKAKLYAAIGYSETAVNPN
LPKHFESMKIHFQMHSLSLSIKESREKPGIIKLSVIDLKAMLTQRPAAQAIKISAQLSSF
EVSGLPRGQTPPILLSPRHVVEAKDKTLLNLMFETNPLDTRVDQRLHIDSLPLEIIYDAM
TVNSMSAFFMPPKDLQLDELTNATLMKLEQFRDKTSTGLMYIIETQKVLDLKINLMASYV
IVPENGFYDPKHNLAILDLGHFQMSSQSRAGLPQLSAGSSTIEDIMSRAYDSFDVKLSSL
QFLYTKAGGDWKRARPLRQSAFHILEPVDLKMVFSRAMVVTDMRMPKFKIYGELPLLSLR
ISDDKVRGVLALLSSIPLPESRPAQQMKAPQVTPKVSKQGNTPQLTPRRPAIDDLRASIM
YGSEEELFFDAPSSPIEDLSFFEASSDSLLSSASQKRLSMVLKDPKKNMTEFLLRFEINK
LSIQLCRLSKGQEVTVLHLFIDGLGTELKLCTFDMSSYTFLREICLECSEYLDCEDKKVN
LITTLDNTVEDLLTLKYIKADKNAPDFKTAYKNTEQLIKVNFSSLDMHLHTEALLNSINF
LNNLLPPLKKEAQEAQPVLPKEEEGEEEEAKLEESAVTEKSTSKKSKFEDVVNLHIRADM
NCLKVFIRGEKARISEISIEGLVSEVQMMKKSVEILANLKNIVILDCDKEALYKKAVSIA
DKEVFDFRMVNYVDATEGDAYTDMHIVDTSVALTVGCIQVIFLNKFVSSILAFINNFQEA
KNALAEVTAQAAEKAATGVLELAERSTRISLDVNINAPVVFLPQSSVSHNVIVADLGLVT
VKNHFEIVTSPTHTKIPPVMDIMALGLSDLKMYRTTFSDGKFKSELQLLKPVNMDLSIKR
NLSASWYHSIPDIQISAHLKPMSLILSQEDLTIVLKTLSENLSETSDDLPASSSSEKEDT
VSTKDSQSSGGNTVVTAAVVEGHKTGKLKTTLKLNFKFDSMTLVLYSPDTNEIHLPDSHD
ESLKLAEFTLGTISTAVHMFSDSSMKASVKLTNVLLDDKRHTVKMITSRMMAMRQGREDK
VMVDVSYQQGRDGTVLDTLIQDLYLCASMEFLLTVADVFRKAMADGFSGPPKSNKQPASS
SKDTAAPAPPVVAKSEMNFVVKDPEIVFVADLTRAEAPALVMTTQCELTMKSEPSGQTMT
AAVSDLKVVACPFLREKRENYVTTVLQPCQVFFQSSQSASQPQNIELSISSLTLKVSPII
INTVMTIQSAVSPAAETPEELESPVSQDLWERRSLKDLKLWFLEEEGEEVTQSITPLIPQ
GESFKINIQSICVTLEAGVGHRTVPMLLAKALFQGDVKNWSTLINLHCHLDLEVNYYNET
MGLWEPLLEPLDDEAKDGFRPWTLALKMKKKPVVYSGISDEVDGSVPEYKTVISITSKDQ
LNITLSKCGLHMLSNLGMAFAEATKQTAECFQTDQAPFVVKNHLGLAVSVLHSEVFRPIG
KESTQHVVELKDGESLNMDYTLTAVSTDQFSAMTSLSTKNYIKPTPVGHTAASVIPLIKT
GRGMYSVMHQESGVTRFFVCQIYTVEGSKYVKIRSPFQIINHFSVPFRVYEGSVCLGVSL
PTEEFCVPLGSYRAELNLQPGVEGDEEYKHSEGFTYNEVIQKPGECLEKTCHHRDSARMM
KINMVPLPDSVMSHSTEEEFDKPFVLHLWPCVLLRNLLPYPITFKLQGNEDSPPSVLKEG
HSSQIHTAILNFSTLELKLLGYLQHDWEAQFSLCSDHDEISFIKFHSLPLDEETEARAEL
DISVHVKKEGQMVVAIHSPYWMVNKTGRLLQYKADDIHRKHPKDYDMPLLFSFKPRNFLQ
NNKVRLMISDSELSDDFSIDTVGHNGRVKCKGKQKDYLVGVKINASSFSLTRLVTFLPFC
MLVNRTKHVIRVCEEGQEHWTEARPGQAAIPFWPERDSKKLRMTVEGCQSSPRAFDFHQP
ENCLLLHLDKTLGGIIVDVNLTEHSVVIRFSDYYDGAAPFLLINHTEEMLQFHQSCRKQK
GSTWIRDELLDLSLSGGDETSSVGSQAEIDELGSGKAVYYTWTEPTGSRILSWKWGQFKG
ELKSEEDKTDVGKKGQLFVITFYEGLQRVALFTTNQSVYKLICESEKMELAQQEISISLQ
NIGISLVNNTTSQEVAFIGITSSDVVWETKPNNRSRWKVLSGKEAAVLEQCYRDYVDRSP
VDDTITDQENDYQVLFAANGLDMRMLQPYDAPLRRNFLPALKVEYSVSARQKAYRVQINR
IQIQNQLPGAIFPFVFYPIKPPQSVSMDSEPKPLADVSIITRAAGHSDILRIKYFMVLIQ
EMDLRMDLGFLYAILEIFTDEHTSAVTSEQEVESFVKDIEYLKTELNHVSATDTSPISLY
EYLHISPIKLHLSLSLSTGGEDGNKKERETEMIPVQSLNLLLKSIGATLTDAQDVLFKLG
FFELRYQFRTTQQLQWEVIRHYSKQAIRQMYALVLGLDVIGNPYLLIRGLSEGVEAFFYE
PYQGAIQGPEEFVEGMALGVKALVGGAVGGLAGAASRITGAMAKGVAAMTMDEEYQQKRR
EAMNKQPSGLREGLTRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAL
TRPTGGIIDMASSTFQGIKRAAETTQDVTSLRPPRFIHEDGVIRPYKEREGIGSQMLQSV
ENGRFAKYRYFAHAKVNDSDFLMITKRGIFFVTKGTFGQLTCEWQYLFDEFTKEPMIVEG
RRLRIEAKERVKSVFHAKEFGKIINFKTPELAKWVLAKLEDARESLPK
NT seq
9687 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtctgtggtggtcgatgtcttaaacaggtttctgggtgattacgtggtg
aacctcgacagctcgcagctcagtctcggcatatggggaggtgatgcaatattgagaaac
cttgaaatcaaagaaaatgccttgagtcaactggacattcctttcaaagtcagggcagga
cacataggttgtttggaattgaaaatcccttggaagaatttgtatgctcagtctgtagag
gccacactggatgaagtctacctgctcatcgtacctactgctagtataaaatatgacgct
gagaaggaggatagacagctacaggaagctcgacagagagagctgcaaagaatcgaggag
accaaacagaaagcagcagaaaaagagaatccaaaggcagagaagcaggatacatttgtg
gagaaactggtcacacaggtgatcaaaaacctgcaagtgaaaatctccaacatacatgtc
cgctatgaggatgacgtcaccaatccaaacgctccactctcattcggagtgtccctgcag
aacctcagtctacagacagctgatcagaattggaacccttgtcttctggacgagaaggcc
aagttgttttttaagcttgtacgtctggacagtctgtttgcatactggaatgtgaattca
gaactttactccaaccacagccctgatgaggccttgcgatgcctgaaacacagtgtagat
gtcaagaattcaatccctcaggattatcatttcatctttcgtccgatatcagcaaatgcc
aagctgcgtatgaatcctcgctcagaggtggatttctcatcgccgaaagttgatctagtg
gtcaacctgcctgaggtggctgttgaacttagccgaccacagtacgtcagcattctggaa
cttttgggttcagtggatatgatgactcgtaaccttccatacagaaagtatcgtccctat
gtgccagttcacactaatgctcatcgatggtggcgatatgtgatcacgggtgttttggag
gtaaatatcaagcccagcctacacatgtggtcatgggaacacatccgtcgtcatcggcaa
catgtaaagaagtacagagagctgtataagaacaagattaccaccaagaaacctggagag
gggctgctgaaggaacttgaggagactgaaaaaactctggatatattcaacatcacaatg
gcaaggcagcaagctgagatggaggcctcaaaagcggggctgcggatatgccgtcctggg
gtgaaggtggaggaagagcagtcacagggctggttcggttggatgtggaactggtctgga
gatagcggtacacaaaacaaagacatcaaaacaggaggttttgatgagctgatgactcct
gcagagaaagccaaactatacgctgccatcggatacagtgagacagccgtcaatcctaac
ctgccaaaacattttgaaagtatgaagatacatttccagatgcacagtctgtctctgtca
atcaaagagagccgagagaagccagggatcatcaaactgtccgtcattgatctgaaagcc
atgttgacacaaagacctgcagctcaggccataaagatctctgcccagctgtcatcgttt
gaagtatcgggtctccctcgtggccagacgccccccatcctgttgtcaccacgtcatgtg
gtggaggcgaaggataagactcttctgaacctgatgtttgagaccaacccactggacacg
cgtgtagaccagagactgcatatagattccctgccgctggagatcatctatgatgctatg
acagtgaatagtatgtcagcattcttcatgcctcctaaagacctgcaactggatgaactt
actaacgccaccctcatgaagctggaacagttcagagacaagacctccacaggcctcatg
tacatcattgagactcaaaaggttcttgatctgaagataaacctaatggcttcatatgtc
atcgtaccagaaaacggcttttacgaccccaaacacaaccttgccattctggatttgggt
cattttcagatgtccagtcagagcagagctggactgcctcagctgtctgcgggtagcagc
actatagaggacatcatgtctcgagcttacgacagctttgatgtcaagctgagcagctta
cagttcctctacaccaaagcaggtggtgactggaaaagggctcgtccactgaggcagtct
gcttttcacattctggagcctgttgacctcaagatggtctttagcagagccatggtggtc
acggacatgcgaatgcccaagtttaagatttacggtgaactcccgctgctctctttgcgg
atctctgatgataaagtgcgtggtgtgctggcattgctcagcagtattccacttcctgag
agtcgccctgcccaacagatgaaagcaccacaagttacacccaaggtgtccaaacaaggg
aacacccctcagctcaccccccgaagaccagccatagatgacctgcgtgcatccatcatg
tacggctcagaggaggagttgtttttcgatgctcccagttcaccgatagaagatttatca
ttctttgaggcttcatcagactcactgctcagttctgcctctcaaaagcgtctctccatg
gtgctaaaagaccccaaaaagaatatgaccgagttcctcctgagatttgagatcaacaag
ctttccattcagctgtgtcgcttgtcgaaggggcaggaagtgactgttctacatttgttt
attgatggtttagggactgaactcaaactctgcacctttgatatgtcctcatacaccttc
ctccgtgagatctgccttgagtgttcagagtacttggattgtgaggacaagaaagtaaac
cttatcaccactctggacaacactgtggaagatctgcttactttgaaatatatcaaggct
gacaaaaatgcaccagattttaaaactgcgtataaaaacacagagcagctgatcaaggtg
aatttctcctcactggacatgcacctgcacactgaggcgctactcaactctataaatttc
ttgaataacctcctcccacctctgaagaaagaggcgcaagaagcacagcccgtccttcca
aaggaggaagagggagaggaagaggaggcaaaactagaggagtctgctgttaccgagaaa
tccaccagtaagaagtcaaagtttgaggacgtagtgaatttgcacatcagagcagatatg
aactgtctgaaggtctttataagaggggagaaagccagaatatctgagatcagcatagag
gggctggtttctgaagttcagatgatgaagaaatcagtggagattctagctaacctgaag
aacattgtcattctggattgtgacaaagaggctttatacaaaaaggcagtgtccatcgct
gacaaggaggtgtttgattttcgcatggtgaattatgtggacgccacagagggggacgcc
tacacggacatgcacattgtggatactagcgtcgctctgactgtgggctgtattcaggtc
atttttctcaacaagtttgtgtcctcgatactggcattcattaataatttccaggaggct
aaaaatgctttggcagaggtgactgctcaggcagctgagaaagcagccacaggtgtcctg
gagctggcagagagaagcactcgtatctccctggatgtaaacatcaatgctccagttgtc
ttccttccacaatcctctgtttctcacaatgtcattgtggcagatctgggtttagtaact
gtaaagaaccactttgagatcgtcacctctccaacacatacgaagatccctccagtgatg
gacatcatggctttgggactgagtgatctgaaaatgtacagaaccacattcagtgatgga
aaatttaaaagtgagcttcagttactcaaaccagtcaatatggacctgtcaatcaaacgc
aatctctctgcctcctggtatcacagcatccctgatattcagatcagtgctcacctcaaa
cccatgagtctgatcttgagtcaagaggatctgactatagtgttgaagactctgagtgag
aatttgtcagaaacatctgatgatcttccagcttcatccagctctgaaaaagaagacaca
gtctctaccaaagattcacagagctctggaggtaacactgtggtgaccgcagcagtggtg
gaaggccataaaacaggcaaactgaagactactctaaaactaaacttcaagtttgactcc
atgaccctggttctgtacagcccagataccaacgagatccatttaccagactcccatgat
gagagtttaaagttggcagagttcacactgggcaccatttccactgcagtgcacatgttc
tctgacagctctatgaaagcttccgtcaaacttacgaacgtcctgctggacgacaagaga
catacagtcaaaatgatcacatccaggatgatggcgatgcgtcagggcagagaagacaaa
gtgatggtggacgtgagttatcagcaaggccgtgacggcactgttctggacaccttgatt
caggacctctatctgtgtgccagcatggagttccttctaactgtagctgatgtgtttcgg
aaagctatggcagacggcttctcaggccctccaaagagcaacaaacagccagccagttcc
tctaaagacacagcagctcccgctccaccagtggttgctaagtctgagatgaactttgtg
gtgaaagatcctgagattgtgtttgtggccgacctcacacgggctgaagctccggctctc
gtcatgacgacgcagtgtgagctgacgatgaagagcgagcccagcggtcagacgatgaca
gcggccgtttccgatctgaaggtggtggcgtgtccgttcctgcgagagaagcgtgagaac
tacgtgacgacggtgctgcagccctgtcaggtgttcttccagagcagccaatcagcttct
cagcctcaaaacatcgagctctccatcagctccctcacgcttaaggtgtctcccatcatc
ataaacacagtcatgaccattcagtcagcagtgagccctgcagccgagacccctgaggag
ctggagagccctgtttcacaggatctgtgggaacgtcgcagcctaaaagatctgaagctc
tggttccttgaggaggaaggagaggaagtcacccagtccataactccactcatccctcaa
ggagagtctttcaaaatcaatatccagtccatctgtgtgacgctagaggccggggtgggt
catcgcacagtgcccatgctgctggccaaagccttattccaaggagacgtgaagaactgg
agcactctcattaacctccactgccacctggacctggaggtgaattattataatgagacg
atgggtttatgggagccgctgctggaaccgcttgatgatgaggccaaagatgggtttaga
ccctggacactggcacttaagatgaagaagaaaccagtagtgtattctgggatatctgat
gaggtggatggcagtgtgcctgaatataaaacggtcatcagcatcacaagcaaagaccag
ctcaacatcactctctctaagtgtggcctacacatgctcagtaatctaggaatggcattt
gcagaggccactaagcagacagcagagtgctttcagacagatcaggctccgtttgtggta
aagaatcatttgggtttggctgtgtcggtgctgcacagcgaggtgtttaggcccatcggt
aaagagtctacacagcatgtggtggagctcaaggatggagagagtctgaatatggactac
accctcacagctgtgtccactgaccagttctctgccatgaccagcctcagtaccaaaaac
tacataaagccaactccagttggtcacactgctgcaagtgtcatcccactaatcaaaacg
ggacggggcatgtacagcgtcatgcaccaagagtcaggtgtcacacgcttctttgtctgt
cagatttacactgtcgaggggagcaaatatgtcaagatccgctctcctttccagattatc
aatcacttctcagtgccgtttcgagtttatgagggttcagtgtgcctgggtgtctctctg
cctacagaagagttctgtgtgccactgggctcgtacagagctgaactaaacctgcagcct
ggagttgaaggcgatgaggagtacaagcactctgagggtttcacttataatgaggtgatt
cagaaacctggagagtgcctggagaagacctgccatcacagagacagtgctcggatgatg
aagatcaacatggttcctcttccagactctgtgatgtcacacagcactgaggaggagttt
gacaagccctttgttctgcacctgtggccctgcgttctcctccgcaacctgctaccatac
cccatcaccttcaagttacagggcaatgaagattctcccccctctgtactaaaagagggc
cactcctcccagatccacacagctatcttgaatttttccactctggagttgaagctcctg
ggatatctgcagcacgactgggaagcccagttcagtctctgcagcgaccatgacgaaatc
agcttcatcaaattccactcgctgccattggatgaggagacggaggcaagggcggagcta
gatatttctgtccatgttaagaaggaggggcaaatggtcgtggccatccactcgccctac
tggatggtgaacaagacgggcagactgctgcagtataaggcagacgatattcatcgcaaa
caccccaaagattacgacatgcccctcctcttctccttcaaaccacgcaacttcctgcag
aacaacaaggtccgcttaatgatctcagacagtgaattatcggatgatttctccattgac
actgttggccataatggtcgagtcaaatgcaaagggaagcaaaaggattatctggtgggg
gtgaagatcaatgcaagcagcttcagtttgacacgtctggtgactttcctgcctttctgc
atgctggtgaacagaaccaaacatgtgatccgtgtctgtgaggagggtcaggagcactgg
acagaagcccgacccggacaggctgccattccgttctggccagagagagactcaaagaaa
cttcgaatgacagttgaaggctgtcaatcatctccaagagcctttgacttccaccaacca
gagaactgcctcttactgcacttggacaaaactctgggtggtattattgtggacgtaaat
ctgacagaacattctgttgtgatccggttctctgattattatgacggtgcggctccattc
cttctcatcaaccacacggaggagatgctacagtttcaccagagctgcaggaagcagaaa
gggtctacttggattcgagatgagctactggatctctctttatcagggggggatgagacc
agttccgttggctctcaagcagaaatcgatgagctgggttcaggtaaggcagtgtattac
acatggaccgagcccactggctcacgaatcctcagctggaaatggggccagttcaaagga
gagctcaaaagtgaagaggacaagacggatgtgggcaagaaaggacaactttttgtcatc
acattttatgaaggcctccaacgtgtagcgctgttcactacaaatcagagtgtttacaag
ctgatttgtgagagtgagaaaatggagctggctcaacaagaaatcagtatctcattacag
aacattggcatttcactggtcaacaacaccaccagccaggaagtggctttcattggcatc
accagttctgatgttgtgtgggaaaccaagcctaacaatcgcagccgctggaaggttttg
agtggtaaagaggctgcagtgttggagcagtgctacagagattatgtggacagaagtcca
gtggacgacaccatcactgaccaagagaacgactaccaggtgctgtttgctgctaatggg
ttggacatgagaatgttgcagccttatgacgctcctctcaggaggaacttcctgcccgca
ttgaaggtggagtacagtgtttccgcccgacagaaagcttacagagtccagatcaacagg
attcagatccaaaatcagttgcctggagcgatattcccatttgtgttctaccccatcaaa
ccaccccagtcagtcagcatggactcagagccaaaaccacttgctgatgtcagcatcatc
accagagcagccggacactctgacattctgcgcatcaagtattttatggtgttgattcag
gagatggacctgcggatggatcttgggtttctgtacgccatactagaaatcttcactgac
gaacacactagtgctgtcacatctgaacaggaggtggagtcgtttgtgaaggatattgag
tatctgaagactgaactgaatcatgtgtctgcgacagatacctcccccatcagcctgtac
gagtacctccacatctctccaataaagcttcatctgagtttatctctgagcactggaggt
gaagatgggaataagaaagagagagagactgagatgatccctgttcagtctctcaaccta
ctgctgaagagtattggagctacactcaccgacgctcaggacgtcctcttcaagcttggc
ttctttgagttgaggtatcagttccgcaccacccaacagctgcagtgggaggtgatccgg
cattactccaaacaggctatcaggcagatgtatgctctggttttgggtttagacgtcatt
gggaatccatatttactgatccgtggtctgtctgaaggagttgaggccttcttttatgag
ccatatcagggtgctatacagggaccagaggagtttgtggaggggatggcacttggtgtg
aaggctctggttggaggggctgttggcggtctggcaggcgcggcttctcgaatcacaggg
gcgatggctaaaggtgtagctgccatgaccatggatgaggagtatcagcagaagagaaga
gaggccatgaacaaacagcccagtgggctgagagaagggctgacacggggagggaaaggc
cttgtgtctgggtttgtgagtggcatcaccggtattgtgaccaaacccattaaaggagct
cagaaggaaggagccgctggtttctttaagggtgttggaaagggtttggtcggagctctg
accagaccaacagggggcatcattgacatggccagcagcacctttcaaggcatcaaacga
gctgcagagactactcaggatgtgacaagtttgcgtccacctcgcttcattcatgaggac
ggagtcattcggccgtataaggagagagagggcattggcagccagatgctacagagtgtt
gaaaacggacggtttgccaaatacagatactttgctcatgctaaggtgaacgattcggat
ttcctgatgatcacaaaaagggggattttttttgtgactaagggcacatttgggcagctg
acatgtgagtggcagtatctctttgacgagtttaccaaagagcccatgattgtggagggc
agaagattacgaatagaagcaaaggaaagagttaaatctgtgtttcacgccaaagagttt
gggaagatcatcaacttcaaaactccagaattagcaaagtgggttcttgccaagcttgaa
gatgccagggaaagtttaccaaaataa
DBGET
integrated database retrieval system
