Myxocyprinus asiaticus (Chinese sucker): 127415591
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Entry
127415591 CDS
T08782
Name
(RefSeq) aggrecan core protein-like isoform X1
KO
K06792
aggrecan 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
masi00535
]
127415591
00536 Glycosaminoglycan binding proteins [BR:
masi00536
]
127415591
04091 Lectins [BR:
masi04091
]
127415591
Proteoglycans [BR:
masi00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
127415591
Glycosaminoglycan binding proteins [BR:
masi00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
127415591
Lectins [BR:
masi04091
]
C-Type lectins
Lecticans
127415591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
DUF5323
EGF
Motif
Other DBs
NCBI-GeneID:
127415591
NCBI-ProteinID:
XP_051510323
LinkDB
All DBs
Position
2:50007335..50031986
Genome browser
AA seq
1372 aa
AA seq
DB search
MRSLLLLSVCICISSEIYTEPESMFTVSIPNELPLQPLMGDTIVLPCYFQDNTVNDPGAP
TIAPLSHRIKWSLVTTEKTTNILVASEGIVNIEERYLDRVSMVGYPMTPTDATIKITELH
SNDSGVYRCEVMHGIEDNYDIVDVQVQGIVFHYRAITTRYTLNFEKAKAACIQNSAVIAT
PEQLQAAYDEGLHQCDAGWLSDQSVRYPIHDPREACYGDKYEFPGVRTYGVKDVNETYDV
YCFAEKMTGKVVHTTSPKKFTFKEAEAECTKQGAQLATTGQLYMAWKGGMDVCNAGWLAD
RSVRYPINIARPQCGGGLLGVRTIYLFPNQTGYPLPDSRYDAFCYSENNEESSGFPDIFP
DMQITTEVGSGVLSVGTITDSSQVFLKHASTESELKGEVVTHKPSMTTSVDSSYTVLNIT
QLPLLPPLSSTGVITDIVEGVSNRTDLESEVSRMNETEAIMSATGVVFHYRSSSSRYAFN
FVEAQLACQSIGAVIASPQQLLAAYEAGYHQCDAGWLLDQSVRYPIVSPREKCSGDLEHV
PGVRSYGLRPADERYDVYCYVDKPRGEIFHASSFEGFTYDEAVAYCQGQNASLASTGDLY
AAWKQGFDKCRAGWLLDRSVRYSINNPRHQCGRGKAGVHTVYLFPNQTGSPDLHTKFDAY
CFKVHLDMSLNESEPNLTVTEEVIVNITSFPSLFRPVFPPITPPIPVEPSGSGSGSSGAS
GTDDLLSSGSGDQPSGSSSSSVDLSGSWSSGDVSGSGISGDGSAILVIFSGSGKVLSGVG
STSGRCEEAGEGSTEILTFPSGQGSGSGSGSGCSSEESASTSDISSSSGESVKIGELSGI
SSGSGSIEESTGFSGFSSGVFPSGGFSGISLVDGSGVIMVDSQWVPSLTEQDLGGSHVDF
SGSGHISGSGVSGDFSGMSGDHSGSGSGLEFSGMTFLGSGLTDLTKQSREEEVYGVLLFG
SGEGSGFTSGGYTIESGERSGASASGDITLFTNGAVIEMSNKPFQGMELGREEVEYSGNV
RLSSASGDDQTVYSSGQEYEWSPATGNTPQLNTSDDPLALLSAQGSSGLYSDAAVPVHYS
EPEGIISKHDAITSAPLLIKPAITSQTPSVNEGPFVKASVNPCDPNPCGAGSCSVQDGVG
LCHCPPGLHGEECQFDVHSCKEGWTKFQGNCYLHMSERETWVDAEQHCRDLNAHLVSITT
PEEQSFFNSYAQDYQWIGLNDKTVENDFRWSDGTPLQYENWRPNQPDNYFNSGEDCVVMI
WHENGQWNDVPCNYLLPFTCKTGPVSCDQPPKVENARMFGNKKERYQVNSIIRYQCNENF
TQRHLPVIRCMADGQWEKPQVECIAKINTRPQKKSTAHHSHKANSTTLEKRL
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atgcggtccttgcttctcctgagtgtatgtatctgcatctcctcagagatttacactgag
cctgaaagcatgttcacagtcagcatacccaatgagcttcctctacagcctctgatgggt
gacacaatagttctaccatgctacttccaggacaacacagtcaatgaccccggtgccccc
accattgcccctttgtctcaccggataaaatggagtctggtcaccacagaaaagaccaca
aacattttagtggcatccgagggcatagtaaacatagaagaaaggtatctggacagggtc
tccatggtgggatacccaatgacacccacagacgccaccattaagatcacagagctccat
tccaatgactcaggagtgtaccgctgtgaggtcatgcatgggatagaggataattatgat
attgttgatgttcaagttcaaggtattgtttttcactatcgtgcaatcaccacacgatat
accctcaactttgagaaggccaaggcagcctgtattcaaaacagtgcagtcatcgccact
ccagagcaactccaagcagcttatgatgagggcttgcaccagtgtgatgcaggatggctt
tcagatcagtcagtcaggtaccctattcatgaccctcgtgaggcttgctatggcgacaag
tatgaatttccaggagtgaggacatatggagtgaaagacgtgaatgagacttatgatgtg
tactgctttgctgagaaaatgacaggaaaagtagtacacacaacttcccctaaaaaattc
acttttaaggaggcagaagctgaatgtacaaagcagggtgcacagttggctaccacagga
cagctgtacatggcttggaagggaggcatggatgtttgtaatgcaggctggttggctgac
aggagtgtccgctaccccatcaacatcgcccgaccacagtgtggaggaggccttctagga
gtgcgtaccatctatctttttcccaatcagaccggctaccctctcccagactcccgctac
gatgcattttgctactctgaaaataatgaggagagttcaggtttccctgacatatttcca
gacatgcagattactacagaggtggggagtggtgtcctgagcgttggcacaatcacagac
agctcccaggtctttttaaagcatgcctccactgagagtgaactaaagggggaagttgta
acacataagccctcaatgaccaccagtgttgactcctcatacactgtgctaaatattacc
cagctgcctcttttgccacctctcagttccactggggtgatcactgacattgtggaaggg
gtcagtaacaggactgatcttgagtcagaggtttcccgtatgaatgaaactgaagctatc
atgtctgccacaggggtggtgttccattaccgctcaagctccagtcgttatgcctttaac
tttgtggaggctcagcttgcatgccagagcatcggtgcagtcattgccagccctcagcag
ctcctggctgcctatgaggctggttaccatcagtgtgatgctggctggctcttggatcag
tctgtcaggtatcccattgtgtctccacgtgagaaatgctctggtgatttggaacatgtt
cctggtgtgaggtcttatggactgcgtcctgctgatgagcgctatgatgtatactgctat
gtggacaaaccaaggggtgaaattttccatgcaagttcattcgagggattcacttacgat
gaagcagtggcttactgccagggccagaacgcctccctggcctccactggagacctgtat
gcagcctggaagcagggctttgataagtgtcgtgctggctggcttcttgaccgcagtgta
cgttactccattaataacccccggcatcagtgtggtagagggaaggctggagttcacaca
gtttacttgttccccaaccagacgggctctcctgacctgcacaccaaatttgatgcgtat
tgcttcaaggttcatctggatatgtctctaaatgaaagcgaaccaaacttaactgtgaca
gaagaagtgatagtgaacatcacatccttccctagtcttttcagacctgtatttccccct
attactcctcccatccctgtggaaccgtctggatctggctctggctcatccggggccagt
ggcaccgatgatctattgagcagtggaagtggggatcaaccgagtgggtcatcaagttcc
agtgtagacctgtcaggatcttggtccagtggtgatgtttcagggtcaggtatcagcggt
gatggctcagctatccttgtaatcttctcaggaagtggcaaagttttgtcaggagttgga
tctacttcagggagatgcgaggaggctggggaaggaagcacagagatcctcacctttccc
tcaggccagggctcaggatcagggagtgggtcggggtgtagctctgaggagagtgcatct
acttcagacatttccagcagctcaggtgagagcgtcaagattggagaactttccggcatc
tcctcaggatcaggttccattgaggagtccacaggtttcagtggtttctcatcaggagtt
tttccctctggaggctttagtggcatttcactggttgatggcagtggtgttatcatggtg
gatagccagtgggttccatctttaacagaacaggatttgggtggaagccatgtggatttc
agcggatcagggcatatctcagggtctggggtgagtggagatttctctggaatgagcggt
gaccacagcggctctggaagtggtttggagttttctggaatgacatttttggggtcagga
ttaactgatctcacaaaacaatctcgtgaggaggaagtgtatggggttttgttattcggg
tctggtgaagggagtggatttacatctggaggctataccatcgaatcaggagaaagatca
ggggcatcagctagtggtgatatcaccctcttcaccaatggtgccgtgatagaaatgtct
aacaagcccttccaaggcatggagctgggacgggaggaggtggagtatagtggcaatgtc
agactgtcctcagcgagtggagatgaccaaactgtctattctagtggacaagaatatgag
tggagcccagcaactggtaacacaccacagttgaacaccagtgatgatcccttagctctt
ctatcagctcaaggatcatcagggctgtacagtgatgctgcagtgcctgtgcattattca
gaaccagaggggatcatcagtaaacatgatgccattacttctgcacctttacttatcaaa
cctgccatcacttcacaaaccccttctgtcaatgaaggcccttttgtgaaagcttctgtc
aacccatgtgatccaaacccctgtggtgccggatcgtgttcagtgcaggatggtgtgggc
ctttgtcattgcccacctggactgcatggagaagagtgccagtttgatgtacacagctgt
aaggagggctggactaagtttcagggcaactgttatttgcacatgtcggagagagagacc
tgggtggatgctgagcagcactgtcgagacttaaacgctcacctggttagcattaccact
ccagaggagcaatccttcttcaactcgtatgcacaagactatcagtggattggattgaat
gataaaacagtggaaaatgacttccgctggtcagatgggaccccactgcaatatgagaac
tggaggcctaaccagcctgacaattatttcaactctggtgaagactgtgttgtaatgatc
tggcatgaaaatggccaatggaatgacgtgccttgcaactacctcctacctttcacatgc
aaaacaggaccagtatcatgtgaccaacctcctaaagtggagaatgccaggatgtttgga
aacaagaaagaacgttaccaggtgaattccattatcagataccagtgcaacgaaaacttc
acacagcgccaccttcctgtgatccgctgtatggcagatggacagtgggagaagccacaa
gtggaatgcatagccaagatcaacacaaggccgcaaaagaaatccacagctcatcactca
cataaagctaatagcacaacattggagaagcgtctttaa
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