Myxocyprinus asiaticus (Chinese sucker): 127415905
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Entry
127415905 CDS
T08782
Name
(RefSeq) ATP-dependent RNA helicase DDX1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
masi03041
]
127415905
03016 Transfer RNA biogenesis [BR:
masi03016
]
127415905
Enzymes [BR:
masi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127415905
Spliceosome [BR:
masi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127415905
Transfer RNA biogenesis [BR:
masi03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
127415905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
127415905
NCBI-ProteinID:
XP_051510873
LinkDB
All DBs
Position
25:complement(15088724..15113606)
Genome browser
AA seq
739 aa
AA seq
DB search
MAAFGEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGRTAVKTGGAVFNKWQMNPYDRSPAFAIGPDGLCCQSREFKEWH
GCRSTKAVIKGKYYYEVACHDQGLCRVGWSTSQASLDLGTDKYGFGFGGTGKKSNNKQFD
SYGEEFTMHDTVGCYLDLDKGHMSFSKNGIDLGLAFEIPQQIKNQPFFASCVLKNAELKF
NFGDEPFKNQPKDGYVALKQAPDGHVVKSTQTGSAKVSQVKSTSNAPRALIIEPSKELAE
QTFNNVSQFKKYVDDPKVRDLLIIGGVAAKEQLSTLESGVDIVVGTPGRLDDLISTGNLD
LSQVRFLVLDECDGLLTAGHTDFIMKVYNQIPQVTSDGKRLQVIVCSATLHSFEVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVSPKTDKLWEKLKTHIRTDEVHAKDDTRPGANT
PEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIKQGGGPDKKGHQLS
CVCLHGDRKPNERKYNLERFKKKEVKFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH
RIGRVGRADRMGLAISLVAMEKEKVWYHVCANRGKGCYNTKLKENGGCTIWYNEKELLSE
IEEHLKCTITQCEPDIKVPVDEFDGKVTYGQRRAAGGGMYKGHVDILAPTVQELANLERE
AQTSFLHLGYLPNQLFKAF
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggctgctttcggcgaaatgggagtgatgcctgaaattgcacaggcagtggaagaaatg
gactggctgttgccaacagacattcaggccgaatccatcccacttattctgggtggagga
gacgtgctcatggctgctgagactgggagtggtaaaactggagccttcagtattccagtc
atccaaattgtttatgagacccttaaagaccagcaggaggggaagaagggacgcacagcg
gtgaagacgggaggagcagttttcaataaatggcagatgaacccctatgacagaagtcca
gcatttgctatcggtccagatggcctgtgttgtcaaagcagagagttcaaagagtggcat
ggctgccgttccaccaaagcggtcataaaagggaagtattattatgaagtggcttgtcat
gatcaagggctgtgcagggtgggctggtccaccagccaggcatcgctggacttggggacg
gataaatatggatttggctttggagggaccggaaagaagtctaacaataagcaatttgat
agttatggagaggagttcactatgcatgacaccgtcggatgctatcttgatctagacaaa
ggccacatgtcattctccaaaaatggtattgatctgggtctggcttttgagatccctcag
cagataaaaaaccagcccttctttgcctcctgtgtgctgaagaatgctgaactgaaattc
aactttggtgatgaacctttcaaaaatcaacctaaagacggctatgtggctctgaagcag
gctccagatggtcatgtggtcaaatccacccagacaggcagtgctaaagtgagtcaggtc
aaatccacctctaatgcccccagagctctcatcattgagccgtctaaagagctggctgaa
cagactttcaacaatgtcagtcagttcaagaaatatgttgatgaccccaaagtaagggat
cttctgatcattggaggagtggctgctaaagaacaactatccactttagaaagtggggtt
gatattgttgttggaaccccaggcagactagatgatctcatatccacaggaaatctggat
ctatctcaagtccgcttcctggttctggatgagtgtgatgggcttctcacagctggccac
actgacttcatcatgaaggtgtacaaccagatccctcaagtcacctcagatggcaagaga
ctacaggtgatagtttgctctgccacactgcactcatttgaagtgaagaagctctctgaa
aagatcatgcacttccccacatgggtagatctaaagggagaagattctgtgccagaaact
gtccatcatgtggtggtgccagtcagccccaaaactgacaagctttgggagaaactgaaa
acccacattaggactgatgaagtccatgccaaggatgacacacgacctggagccaacacc
ccagagatgtggtcagaagctattaagattttgaagggagagtatacagtgagagctatt
aaggagcataagatggatcaggccatcatcttctgccgaaccaagatcgactgtgacaat
atggagcagtacttcatcaagcaaggaggaggtccagacaagaaaggacaccagctctct
tgtgtttgtcttcatggagacaggaaaccaaatgagcgcaaatataacttggagagattc
aagaaaaaagaagttaagtttctgatttgcacggatgtagctgccagaggaattgatatc
catggtgttccatatgtgataaatgtgactctaccagatgagaagcagaactacgtgcat
cgcatcggaagagttggcagagcggacaggatgggcctggctatatcactggttgcgatg
gagaaagagaaggtgtggtaccatgtttgtgccaacagaggaaaaggctgctataacacc
aaactcaaagagaacggaggctgcacaatttggtacaatgagaaagagctgttgtcagaa
atagaggaacatctgaaatgcaccattactcagtgtgagcctgacatcaaagtgcctgtc
gatgaatttgatggcaaagtaacttatgggcagcgcagggctgcaggaggtggtatgtat
aagggtcatgtggatatactggccccaactgtacaggaactggccaacctggaaagagag
gcacaaacatccttccttcatctcggctatctacccaaccagctcttcaaagcattctga
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