Myxocyprinus asiaticus (Chinese sucker): 127415949
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Entry
127415949 CDS
T08782
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein Ub
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127415949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
masi03041
]
127415949
Spliceosome [BR:
masi03041
]
Common components
Common spliceosomal components
hnRNP proteins
127415949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
Zeta_toxin
SAP_new25
Motif
Other DBs
NCBI-GeneID:
127415949
NCBI-ProteinID:
XP_051510952
LinkDB
All DBs
Position
25:complement(13388320..13401077)
Genome browser
AA seq
787 aa
AA seq
DB search
MSAINVKKLKVNELKDELKKRQLSDKGLKAELMERLQAALDAEAQAEEAAETEENVAEVK
DVASEQEQIGEEEPEGESMEAEEQNGDGSGDAAAVGDGEELVQDDEMGEEEDDAGVEMDK
AVDDEEEDDDIIDKIDDEDGEPESHAADGDADKDISADQKNKKGVKRRREEHGRGYFEFI
EESKYSRAKSPQPPLEEEDEEFDDTLACLDPYNCDLHFKVSRDRYSASSLTMESFAYLWA
GGRASYGVNKGKACFEMKITEKIPVKHVNSKSMVVHDVHIGWSLANGNNLLGEEEHSYSY
SSKGKKTTNCVTEDYGENCDENDVIGCFINFEGAEVEISFSKNGKDLGVAFKVSKESLAG
QTLFPHVLCHNCAVEFNFGQRETPFFPQPEGFTFLQQIPVDVRIRGPKGPETKKDCEVIV
MVGLPGSGKTEWVKKHIEENPGKYSILGTNIIVEKMMIDSMKRQNKDTAKLSAISQRAPL
FLGKFIEIAARKKRNYILDQTNISAPAQRRKMCLFAGFQRKAVVVFPKDEAYKERTQKKV
ETDGKDIPEHAVLKMKGIYTLPEVGDCFSEVTYVELQKEEATKLLEQYKEESKNALPPEK
KANQGLMSPKKGAVRGKGPKIQFNRGGGSGPRGGRGGFQSRGNFRGMPAPRVRGGFNRPP
RGFLPPPPPPPPVFRGGFRSQGNFNRGGGMPNRGMAPRRGHMRGNMGNRGGAISRGGPGN
RGNMSRGGGPNHRGNFQQKFHGRGGHQQNRGGFGNKNGSYTQAFNQSWQQGFWNQKPWNQ
QYHPGYY
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaatcaacgtgaaaaagctcaaggtaaacgagctgaaggacgagctgaagaag
cgccagctctccgacaaaggattgaaggccgagctcatggagcggctacaggccgcgctc
gatgcagaggcccaggctgaagaagcagcagaaacagaagaaaacgtagctgaagtcaaa
gatgttgccagcgaacaagaacagataggagaagaagagccggagggagagagcatggag
gccgaggagcagaatggagacggtagtggtgacgccgctgcagtgggtgatggtgaggag
cttgttcaagacgacgaaatgggcgaagaggaggacgacgccggggtggaaatggacaaa
gcagttgatgacgaagaggaggacgacgacatcatagacaaaatcgacgacgaagatggt
gagccagaatcccatgcagcagatggggatgcggacaaagacatcagtgctgatcagaag
aataagaagggtgttaagagacgccgggaggaacatggaaggggctactttgaatttatt
gaagaaagcaaatacagccgggccaagtctccccagccgccactggaggaagaggacgaa
gagtttgatgacaccctggcctgcctggatccctacaattgtgacctgcatttcaaagtg
tccagggaccgttacagtgcctcctctcttaccatggaaagttttgcttacctttgggca
ggtggccgtgcctcatatggtgtaaacaagggcaaagcctgctttgaaatgaagatcact
gagaaaattccagtcaagcatgtaaacagcaaaagcatggttgtccatgatgtccatata
ggctggtccctggctaatggaaataatttattaggtgaggaggagcattcctactcctat
tcaagcaaagggaagaagactacaaactgtgtgactgaagactacggggaaaattgtgat
gaaaatgatgtcataggctgctttattaattttgaaggggccgaagtggagatttcgttt
tccaaaaatggcaaggaccttggtgtggctttcaaggtcagtaaggagtctttggctggg
caaactcttttcccccatgtgctttgccacaactgtgccgttgagttcaattttggtcag
agggagacaccattcttcccccaaccagagggcttcactttcttgcagcagatccctgtg
gatgtgcgcatcagaggacctaagggacctgagaccaagaaagattgtgaggttattgtc
atggtcggtctccctggatctggaaagactgaatgggtgaagaaacatattgaagagaac
cctgggaagtacagcatccttggcaccaacatcatcgtggagaagatgatgattgacagc
atgaagaggcaaaacaaagacacagcaaagctctctgccatctctcagcgtgctcctctg
ttcctgggcaagttcattgaaattgctgcccgcaaaaagagaaactacatcttggatcag
acaaatatctctgcgccggctcagagaagaaagatgtgtctttttgctggatttcagcgc
aaagctgtggtggtcttccccaaagacgaggcctacaaggagaggacacagaagaaagtg
gaaacagatggcaaagacatccctgaacacgctgttctaaaaatgaaaggtatctacaca
ttaccagaagtaggggactgcttctcagaggtcacctatgtggagcttcaaaaggaagag
gccaccaagctcttggagcagtacaaggaagagagtaagaatgctttaccgccagagaag
aaagccaaccagggcttgatgtcccccaaaaagggtgctgtacgaggcaaagggcccaag
atccagttcaatcggggtggtggctcaggccctcgtggaggcaggggtggattccagagt
cgtggaaacttcagaggaatgccagcaccacgtgttcgtggtggttttaaccgaccccca
cgtggcttcttgccaccaccgccgccaccaccacctgtcttccgaggtgggtttcgtagc
caaggcaacttcaacagaggtggtgggatgcccaaccgaggaatggctcccaggcgtggg
cacatgaggggcaacatgggcaacagaggtggtgcgataagccgcggagggccagggaac
agaggtaatatgagccgcggtggtggacctaaccacagaggaaacttccagcagaaattc
catggcagaggaggccaccagcagaaccgtggtggttttggcaacaaaaatggaagttac
acccaagcctttaaccagagttggcagcaagggttctggaaccagaagccatggaatcaa
cagtaccacccaggatattactga
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