Myxocyprinus asiaticus (Chinese sucker): 127416303
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Entry
127416303 CDS
T08782
Name
(RefSeq) pre-mRNA-processing factor 39-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
masi03041
]
127416303
Spliceosome [BR:
masi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
127416303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_16
TPR_15
HrpB1_HrpK
ARM_TT21_2nd
Motif
Other DBs
NCBI-GeneID:
127416303
NCBI-ProteinID:
XP_051511537
LinkDB
All DBs
Position
25:975851..991387
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AA seq
759 aa
AA seq
DB search
MEDSGDPMMGMLDTNAPDNGDAPAMEATGPDYSTDLTAPGWTVAQVPLANPESAEYDQVQ
QVTAMEQYQLYSMEHMKSAADNIDQKSSGSDTSLDNSGQVVGQLSESNGQHVDQSAEPDA
MKQAAGDSESPSNMELEDVPKEGAEAAAELTETQEPELPLEYERLYKVVEDNPEDFNGWV
YLLQYVEQENHLVASRKAFDAFFLHYPYCYGYWKKYADIERKHGCIQVADEVYRRGLQAI
PLSVDLWLHYITFLRENQDTSDGEAENRIRASYEHAVLACGTDFRSDRLWEAYISWELEQ
EKLANVTAIYDRVLCIPTQLYSQHFQKFKEHVQNNNPKHFLSEEEFVQLRVELANANKPN
EDDAPGEELPPGTEDLPDPAKRVTEIENMRHKVIETRQETFNQNEHEVSKRWAFEEGIKR
PYFHVKALEKTQLNNWREYLDFELENGTPERVVILFERCLIACALYEEFWIKYAKYLESY
STEGVRHIYKKACTIHLPKKPAVHLLWAAFEEQQGNIEEARSILKAVEVAVPGLAMVRLR
RVSLERRHGNMDEAETLLRDAIMNGNNASESSFYAVKLARQLLKVQKSIAKAKKVLMEAI
EKDETNPKLYLNLLELEYSGDVQQNEADIIACFDRALNSPMSLESRVTFSQRKVEFLEDF
GSDINVLVAAFDEHQKLVKEQDSTKRKAENGSQEPDAKRQRTDDQSAASGQVMQDMQANH
AGYNYNNWYQQYNSWGGQNSWGPYGQYGQYNQYYPPPPT
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggaagactctggtgatcccatgatgggaatgctggacacgaatgcccctgacaatgga
gatgctcctgctatggaagcaacggggcccgattatagcacagatctgaccgctccaggc
tggactgttgcacaggttcccctcgcaaacccagaaagtgcagaatacgatcaggtgcaa
caggtgaccgccatggaacagtaccagctgtactcgatggaacacatgaaatccgcagca
gacaacattgaccagaagtccagtgggtcggacaccagtctagataactctgggcaagta
gtcggacagctgtcagaatcaaacggacagcatgtggaccaatcagcagagccggatgcc
atgaagcaggcggccggcgactcggagagcccttcaaatatggagctggaggatgtgccc
aaagagggagcagaagcagctgcagaattgactgagacacaagagcctgaacttccctta
gagtacgagaggctatataaggttgtggaagataatcctgaagacttcaacggctgggtg
taccttctgcaatatgttgaacaagagaaccacctggtggcttcaaggaaggcgtttgat
gcatttttcctacactatccctactgttatggatattggaagaaatatgcggatattgag
aggaaacatggctgcattcaggttgcagatgaggtgtaccggcgaggcctgcaggccatt
ccgctcagtgtcgacctgtggcttcattacatcacgttcctgagagagaaccaagacacc
agtgacggagaggcggaaaatcgcatcagagcgtcctatgagcacgcagtcctcgcctgc
ggaacagatttccgttctgaccgtttgtgggaagcgtatatcagctgggaactggagcag
gagaagctggctaacgtcaccgccatctatgaccgcgtcctctgcattcccacacagctg
tactcgcagcacttccagaagttcaaagagcacgtacagaacaacaaccccaagcacttc
ctgtctgaggaggagtttgtgcagctccgagtggaactggccaacgctaataaacccaac
gaagatgatgcacctggtgaagaactaccaccgggcacagaagacctgcctgatcctgct
aagagggtgacggagatcgagaacatgagacataaagtgatcgagacgcgacaggagacg
ttcaaccaaaatgagcatgaagtcagcaagcgctgggcttttgaagaggggatcaagcgt
ccgtacttccacgtgaaagcgctggagaagacccaactgaacaactggagagagtacctg
gacttcgagctggagaacggcacgccagagcgagtggtgattctgttcgagcgctgcctg
atcgcctgcgcactctacgaggagttctggatcaagtacgccaagtatctggagagctac
agcactgaaggagtgaggcacatctacaagaaggcctgcaccatccacctgcccaagaaa
cctgccgttcacctcctctgggcggcgttcgaggagcagcaagggaacattgaggaggcc
cgtagcattctgaaagcagtagaggtggcggtcccaggattggccatggtgaggttacgc
agggtgagtctggagcgtcgtcatggcaacatggatgaagcggagaccttattgcgtgat
gccatcatgaacggaaataatgccagtgagtcatcgttctatgctgtgaaactggcccga
cagctgctgaaggtgcagaagagcatcgcaaaggccaagaaagttctaatggaggccatc
gagaaagacgagacgaacccaaagctctacctgaatctgctggagctggagtacagtgga
gatgttcagcagaacgaagccgacatcatcgcatgcttcgacagagctctgaacagcccg
atgtcgctggagtcacgcgtcactttctcacaacgcaaagtcgagtttctcgaggacttc
ggcagcgacatcaatgtgcttgtggccgcattcgatgaacatcagaagcttgtaaaggag
caagactcgacaaagaggaaagcagagaacggctcacaggagccagatgcaaagagacaa
cggacagatgaccaatcagcagcctccggtcaagtgatgcaggacatgcaggccaaccac
gctggatacaactataacaactggtatcagcaatataattcatggggaggtcagaattcg
tggggtccgtatggccagtacggccagtataaccagtactaccctccaccccccacataa
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