Myxocyprinus asiaticus (Chinese sucker): 127416314
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Entry
127416314 CDS
T08782
Name
(RefSeq) pre-mRNA-processing factor 17 isoform X1
KO
K12816
pre-mRNA-processing factor 17
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127416314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
masi03041
]
127416314
Spliceosome [BR:
masi03041
]
Complex C
Other components
Step II factors
127416314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
127416314
NCBI-ProteinID:
XP_051511564
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All DBs
Position
25:complement(1830930..1861758)
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AA seq
578 aa
AA seq
DB search
MAAAVGSLVSYGSDSDSENESESATSTQKVDPDAVAHLQPLKSGGITTVAVLNSAPEVAV
KEDVETGVHLDPALKEVNYNPTFETMFAPEFGPINPFRTQQMAAPRNMLSGFTEPAHVND
FMFEQQRRTFSTFGYALDPSVDTSQVSSSSYIGAIEEAEKNKGLTVFETGPKKSEKRKKV
KGGDASDIDSFLGPWAKYQDEKDVAKPSEEEQKELDEITAKRQKRGKNEEEAPAEEKTIL
HIKDACDYQGRSYLHIPQDVGINLRSADIPDKCYLPKKQLHVWTGHTKGVSAIRLFPVSG
HLLLSCSMDCKIKLWEVYSDRRCVRTFIGHSKAVRDVCFNNTGTQFLSAAYDRYLKLWDS
ETGQCIARFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEVVQEYDRHLGAV
NTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSM
DNQILIFGAQNRFRLNKKKVFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTK
LYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgcggtgggttccctcgtttcttacggcagcgactcagattcggaaaatgag
tctgaatccgctaccagtactcagaaagtcgatccggacgcggtcgcgcatcttcagcct
ttaaaatcgggcggtattacgactgtagccgtcctgaattcagctcctgaagtcgctgtt
aaggaagatgttgagacaggtgtgcatctggatccagccctcaaggaagtcaattataac
cctacatttgagaccatgtttgctccagagtttggtccaattaacccattcagaacccag
cagatggctgcgccgagaaacatgttgtctggtttcacagaaccggcccacgtcaacgac
ttcatgtttgagcagcagcggagaacattctctacgtttggttacgctttggacccgtct
gtggacaccagtcaggtctcgtccagcagttatattggagccatagaagaggcagagaaa
aacaaagggctaaccgtgtttgagactggacccaagaaatcagagaagaggaagaaggtg
aaaggcggagatgcgtcagacattgacagtttcctgggcccctgggccaaataccaggat
gagaaagatgtggccaaaccctcagaggaggagcagaaagaattggatgagatcacagct
aagagacagaagagaggaaagaatgaagaagaagctccagcagaggagaagaccatctta
cacattaaagatgcgtgtgattatcagggccgctcgtatctacacattcctcaggacgtg
ggcatcaacctgcgatctgcagacataccagacaaatgttacttgcccaagaaacagctg
cacgtgtggaccggacacactaaaggtgtcagtgcgatccgtttgtttcccgtatctggt
catctattgctctcctgctccatggactgtaaaatcaagttgtgggaggtttatagtgac
cgaaggtgtgtgcggacatttatcggtcacagtaaagccgtgcgtgatgtgtgtttcaat
aacaccggcacacagtttctcagcgccgcctacgacagatatctcaaactctgggactca
gagactggccagtgcatcgcccgcttcacaaacagaaaggttccctactgcgtgaagttc
aaccctgatgaagacaaacaaaatctgtttgttgcaggaatgtcagacaaaaagatcgtc
cagtgggatatccgctctggtgaggtcgtacaggaatatgacagacatctgggtgccgtc
aacaccatcacgttcgtggacgagaaccgtcgattcgtcagcacctccgatgacaaaagt
ctgcgtgtgtgggagtgggatattcctgtggacttcaaatacatcgctgagcccagtatg
cattcaatgcccgctgtcacactttcacccaacggtaaatggttggcctgtcagtcgatg
gataatcaaatcctgatattcggagcgcagaatcggttccgtctcaacaagaagaaggtg
ttcaagggtcacatggtggcgggatacgcctgtcaggtggacttctccccggatatgagt
tatgttgtatccggtgatgctgatggaaagttgaatatctgggactggaagaccactaaa
ctgtaccaccggatcaaagcgcatgataaagtttgcatcagcgcgctctggcaccctcac
gagacctctaaagtcatcacctgcggctgggacggacagatcaaactctgggactaa
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