Myxocyprinus asiaticus (Chinese sucker): 127416389
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Entry
127416389 CDS
T08782
Name
(RefSeq) retinoic acid receptor RXR-gamma-B-like isoform X1
KO
K08526
retinoid X receptor gamma
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03320
PPAR signaling pathway
masi04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
127416389
03320 PPAR signaling pathway
127416389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
masi03000
]
127416389
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
masi03310
]
127416389
Transcription factors [BR:
masi03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
127416389
Nuclear receptors [BR:
masi03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
127416389
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
Motif
Other DBs
NCBI-GeneID:
127416389
NCBI-ProteinID:
XP_051511688
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Position
25:complement(14540541..14586047)
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AA seq
458 aa
AA seq
DB search
MDNNDTYLHLNTSALNSSLSQHPPMSSMVGHPSVISSSRLLQSPMSTLGSSMNGLTSPYS
VIIPSLGSPSISLPSAPSMGFNTLSSPQINSLNVTSSEDIKPPPGLAPLGNMSSYQCGSP
GSLSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDSKECLIDKRQRNRC
QYCRYQKCLAMGMKREAVQEERQRGKEKSDNEVESTSSFNEDMPVDKILDAELAVEPKAE
TYSEDTPGNSVSHRFETNDPVTNICHAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAG
WNELLIASFSHRSITVKDGILLGTGLHVHRSSAHSAGVGSIFNRVLTELVSKMKDMQMDK
TELGCLRAIVLFNPDAKGLSNPAEVEALREKVYASLETYTKQKYPDQPGRFAKLLLRLPA
LRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggataataacgacacatacttacatctcaacactagtgctctgaattcctccctttct
cagcacccacccatgagctccatggtgggtcatccatccgtcatcagttcctcccgccta
ttgcagtctcccatgagcacgctgggttcctccatgaatggcctaacctcaccctactct
gtcatcatcccgtctttgggttccccatcaatttccttgccatctgcgcccagtatgggc
tttaacactctcagcagcccgcagattaactctttgaatgtgactagctcagaggacatc
aagcctccaccgggattggccccactgggcaacatgagcagctatcagtgcggtagccct
ggatccctgtccaaacacatctgtgccatttgcggggatcgatcttcagggaagcactat
ggtgtttacagttgtgaaggttgcaaaggcttctttaagagaaccatccgaaaagacctg
acctatacgtgtcgagacagcaaagagtgcctgatcgacaaacgccagcgcaatcgctgc
caatactgccgctaccagaagtgcctggccatgggcatgaagagggaagcggtccaggaa
gaaaggcagcgtgggaaggagaaaagcgataatgaggtggaatcaacgagcagtttcaat
gaagacatgcctgtggataagattctggatgcagagctcgcagtcgaacctaaggctgag
acttattcagaggacaccccaggcaactcagtaagccacagatttgaaacgaatgatcca
gtcaccaatatctgccatgcagctgacaagcagctgttcactctggtggagtgggccaaa
agaatacctcatttttccgatctgcctctggatgatcaagtcattctgcttcgagcagga
tggaatgagctcctcatcgcttcattctctcatcgctcaatcacagttaaagatggcatc
ttattgggcacaggcctccacgtccacaggagcagtgctcacagtgctggtgtgggctcc
attttcaacagagtacttaccgagctggtttctaaaatgaaggacatgcagatggataag
acagaactgggttgccttagggccatcgttctcttcaaccccgatgcaaaaggcttgtca
aacccagcggaggtagaagcactgagggaaaaggtttatgcctcacttgaaacctacacc
aaacagaaataccccgaccagcctggcaggtttgctaaacttttattgcgtctacctgct
ctccgatccatcgggctcaagtgtttggagcacctatttttcttcaagctgattggcgac
acgccgatagacactttcctgatggagatgcttgaagccccccaccagatcacgtga
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