Myxocyprinus asiaticus (Chinese sucker): 127416459
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Entry
127416459 CDS
T08782
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04140
Autophagy - animal
masi04148
Efferocytosis
masi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127416459
04148 Efferocytosis
127416459
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127416459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
masi04131
]
127416459
Membrane trafficking [BR:
masi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
127416459
Hops complex
127416459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_16
zf-RING_Vps41
zf-C3HC4_2
DUF2229
zf_RING_Vps8
zf-RING_11
zf-RING_2
zf-RING_UBOX
zf-ANAPC11
zf-rbx1
DUF5600
zf-C3H2C3
DUF2175
KNOX2
DUF1664
zf-RING_5
ANAPC4_WD40
DUF4446
Motif
Other DBs
NCBI-GeneID:
127416459
NCBI-ProteinID:
XP_051511799
LinkDB
All DBs
Position
25:19333962..19340173
Genome browser
AA seq
974 aa
AA seq
DB search
MASILDQYEDSQNIRQHSRVSAANIGITHSGFVNVRLEEEKPIFNKQRIDFSPPEKINDF
SVCNNQLCMSLGKDTLLRIDLGKPDQPNQIELGRKDDSKVHKLFLDPTGSHLVISLTTNE
CVYLNRNTQKVRSLSRWRGHLIESIGWNKLVGSETNTGPILVGTSQGIIFEAEISASEGS
LFNTNPDQYFRQVHSLEEDGKPAPVCCLEVERGMESKYFIVATTRKRLFQFVGKLAEGSE
QQGFSSIFAQNQDLLPSFQEFPVNMGYSEITFYTSKLRSCPKTFAWMMGNGVLYGQLDYV
RPDSLLSDVQVWEYTSDIDLNFVKPISIVLTQFHFLLLLSDRVRGICTLNGQVVHEDVFP
EKFGPLKKMIKDPITGLVWIYTEKAVFRYHIQREARDVWQMYMSMNKFDLAKEYCKDRPE
CLDMVLAKEAEHCFQNKRFLESAKCYALTQNYFEEIALKFIEAKQEDALKEFLNKKLTNL
KPSEKTQITLLVTWLTELYLNRLGQLEADDSKQHIFQETREEFRTFLKSPKHKDCFYNNR
STIYDLLASHGDVDNMVYFSVIMQDYERVISHYCQHDDYSAALDVLSKHCDERLFYKFSP
VLMQHIPKKVVDAWIQMGNRLDPKNLIPALVNYSQMGSMQQINETIRYMEFCVYELDVKD
EAIHNYLLSLYAKHKPDALLWYLEQAGTHASDIHYDLKYALRLCAEHGYLQACVLVYKIM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIACHVVQEEKDVKKAMNCLSSC
NLLKIEDILPFFPDFVTIDHFKEAICSSLEEYNKHIEELKQEMEEATESAKRIREDIQEM
RNKYGVVESQEKCATCDFPLLNRPFYLFLCGHMFHYDCLFQEVIPHLSGYKQNKLEELQK
KLEATTQTTKSRHKPREEDTVSLGKGQGSREQIKSDIDDIVASECVYCGELMIKSIDKPF
IDPQKFDEEMSSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaattcttgatcaatatgaagattctcagaacatccgtcaacacagccgtgtc
tctgcggctaacattgggattactcattcagggtttgtgaatgtaagactggaggaagag
aaacccatattcaataagcaacgcatcgatttctcccctcccgaaaaaatcaacgacttc
tcagtgtgcaacaaccagttatgcatgagtctggggaaggacaccctactaagaattgat
cttggaaaacctgatcagccaaatcagattgaattgggaagaaaggatgacagcaaagtg
cacaaacttttcctggatccaacagggtcacatttagtcatcagcctaactacaaatgaa
tgcgtatacttaaatagaaacactcagaaggttcgaagtctatcacgatggagaggccac
ctaatagaaagtataggttggaacaaattagtaggctctgagaccaacactgggccgatt
ctggttggcaccagccagggcattatatttgaagctgagatatctgcgtcagagggcagt
ctcttcaacaccaacccagaccagtacttcagacaagttcactccctggaagaggatggt
aagccagcaccagtttgttgccttgaggtggaacgtggcatggaatcaaagtatttcata
gttgctaccacacggaaacgcctgtttcagtttgtaggaaagttggcagagggctctgag
cagcaggggttcagctccatctttgcccagaatcaggatctgttacccagcttccaggag
tttcctgtcaatatgggctacagtgagattactttctacacatcgaagcttcggagttgc
cccaagacctttgcctggatgatgggcaatggggttttgtatggacagttggactatgtg
cggcctgactctctacttagtgatgtgcaggtgtgggaatacacatcagatattgatttg
aactttgtcaagcccatctctattgtacttacccagtttcatttcctacttctgctctct
gaccgtgtgaggggtatctgcactttgaatgggcaagtggtgcatgaagacgtgtttcca
gaaaaatttggccccctaaaaaagatgatcaaagatcctatcactgggcttgtgtggatt
tacactgaaaaagctgtctttcgctaccacattcagagagaagcaagggatgtttggcaa
atgtacatgagcatgaacaagtttgatctagctaaggagtactgcaaggatagaccagaa
tgtttagatatggtactagccaaggaggcagagcactgcttccagaacaaacgcttcctg
gagagtgctaagtgttatgctctcactcagaactactttgaggagattgcattgaagttc
attgaggcaaagcaggaggatgccttgaaggaatttctgaataagaaactaactaatctg
aaacccagtgagaagactcagatcaccctgcttgtgacttggttgactgaactatatctc
aaccggcttggtcagctggaggcagatgacagtaaacaacacatctttcaggaaacccgt
gaagagtttcgcacctttctgaaaagccctaaacacaaagattgcttctacaacaatcgc
agtaccatctatgacctgctcgctagtcacggggacgtggacaacatggtctatttctcg
gtcatcatgcaggactatgagcgtgttatatctcattactgccagcatgatgactacagt
gcagctttggatgtcctctccaagcactgtgatgagaggctcttctacaagttctccccg
gttcttatgcagcacattcccaaaaaggtggtagatgcttggattcagatgggaaaccgg
ttggatccaaagaatctgatcccagcattggtgaactacagccagatgggcagtatgcaa
caaattaatgagactatccgctacatggagttctgtgtgtatgagctggatgtcaaagat
gaggctattcacaattacttactctcgctttatgctaagcacaagccagatgccctgttg
tggtaccttgaacaagcaggaacgcatgcctcagacattcactacgacttgaaatatgcc
ttgcgcctttgtgctgaacatgggtatctgcaagcctgtgtcttagtttacaagattatg
gagctgtatgaggaagctgtggatctagcactacaagtggatgtagatttggccaagtct
tgtgctgaccttcctgaggatgatgaggaactgaggaagaagctgtggctgaagattgct
tgtcatgtggttcaggaggagaaagatgtaaagaaggccatgaattgtctgtccagttgc
aacctgctcaagattgaggacattttacctttctttccagattttgtaacaatagaccac
tttaaggaggcaatttgcagctccttggaggagtacaataaacacattgaggagctgaaa
caagaaatggaggaggccacagaaagtgccaaacgtattcgtgaagacatccaagagatg
agaaacaaatatggggtggtggagtcccaggaaaaatgtgccacttgtgatttccccttg
ctcaatcgacctttctatctcttcctgtgtggacacatgttccattatgattgtctcttt
caggaagtcatccctcacctctctggctataagcagaataaactggaggagcttcagaag
aagttggaagcaactacgcaaaccaccaaatccaggcacaagcctagagaggaggataca
gtcagtctaggcaagggccagggtagcagagagcagatcaagtcagatattgatgatatc
gttgctagtgagtgtgtctactgcggtgagctgatgatcaaatctattgacaagcctttc
atagatccacaaaagtttgatgaagagatgtccagctggctctaa
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