Myxocyprinus asiaticus (Chinese sucker): 127416587
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Entry
127416587 CDS
T08782
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127416587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127416587
03036 Chromosome and associated proteins [BR:
masi03036
]
127416587
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127416587
Coactivators
SAGA/TFTC/STAGA complex
127416587
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
127416587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
127416587
NCBI-ProteinID:
XP_051511964
LinkDB
All DBs
Position
26:complement(38877420..39005745)
Genome browser
AA seq
927 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLVGQNDAATAQPENTHPGCANTHPGIAKQ
QAGGRAQLPASVDSPSEPTQQQQQPQQQQHGRKAAGNSDSLLKEASKDKQTKALEKENTL
RSHGNIVIITTASDGAPPGNKGESQRDTRKKHPVNTRSLRGAASPSLNGNGGAAASAAAS
PTTSNSPPGTVTTAVTLPFPNSTTFTVSSNPQSIALDRGTPTIALQRLPRHIIASIAQNG
NGTSVSALVQQAARIGEADAQVNHSKPADVKPAVNSVSSPATTSVTSSPVKPAVSVSAAP
VSPVIRPVQTQTQTRPATPAQQRVVTPQLIVRPPQQQTTIQLPPGFTIPPGMVLVRTEMG
QLVMVPQQALAQAQAQNSISPRPSTPTTGTTFRVTTPQSPVSAQAIRPAPVAQTKPVLSS
SPNAAAQTSTATGPTKAPVAAAVAMTAPQQVQPALGPQGPLTQMPLAPQSAATPVPGALV
VSQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVKALVQDLLDAKIDPEEFTSRLQSE
LKSSPQPYLVPFLKKSLPALRLSLLNSQQLLTQPLQPNKTSISPVQTGVSVRPHQPNSTT
VLPQGIKRAAGPGGQIRMPVVITQTVRAAGTLGKPAAIQTCKSPVGVTIQLSGNQKNKLN
DPGGSSFRDDDDINDVASMAGVNLNEESARILATNSELVGTQIRSCKDEAFLPTGLLHRR
ILETAKKFGVTEVPLDAVNFISHATQSRLRTVVEKVSSIAQHRMDSSKEDEWYEQSSDVR
SQLKFFEYLERMEKQRKDEREREILLRAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQ
RDANLTALAAIGPRKKRKVDSPGATTTGTEVLGSSAVSPSGTSTPPSSSRQYSRQRITRI
NLRDFIFYMEQERETSRSLLLYRALLK
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccctctggaagacatgctcttctccgaggtggacgaaaaagcc
gtgagcgacctagtgggctccctggagtctcagctggtgggccagaacgatgcggccact
gcacagcccgaaaacactcacccgggctgcgcaaacacacacccgggcatcgcaaagcag
caggcgggaggaagagcgcagctgccagccagtgtagacagtccatcagaaccaacacaa
caacaacaacaaccacagcagcagcagcacgggcgtaaagctgcgggcaactcggattct
ctcctgaaagaagccagtaaggataaacaaacgaaagccctggagaaggagaacaccctg
agatcacatggcaacatcgttatcataaccacagcatctgatggggcaccgccgggaaac
aaaggtgagagccagagggacacccgtaagaaacacccggttaatacgcgctccctgagg
ggcgcagcatcacccagtctcaatggcaacggaggagccgcagcatcagcagcagcatca
cctactacatccaactctcctcctggtaccgtaaccaccgccgtgaccctgccgttcccg
aacagcacgactttcaccgtgtctagtaacccgcagtcgatcgcgctggaccgcggaacg
cccaccatcgcgctgcagcgactcccgcgtcacatcatcgccagcatcgcgcagaacggc
aacggcacctccgtgtccgcgctggtccagcaggcagcccggataggagaggcggacgcg
caggtaaaccacagtaagcccgcagacgtgaaaccagcggtgaattcggtgtccagtccc
gcgacgacttcggtgacttcttctcctgtcaaacccgcagtcagtgtcagtgcggctcca
gtgagcccggtgataagacccgtgcagacgcaaacgcagacacgtcccgctacacctgcg
caacagagggtcgtcacgccgcagctgattgtcagaccaccacaacaacaaactactatt
cagctgccacctggattcaccatcccaccaggtatggttctggtgcgaacagagatgggt
cagctggtgatggttcctcagcaggctttggctcaagctcaggcccagaacagcatctca
ccgcggccctccacacccaccaccggtaccaccttcagggtcacgaccccacagtctcct
gtaagcgctcaggcgattcggcccgctcccgtggcacagactaaaccggtcctgtccagt
tctcccaatgccgcagcccagaccagcacagcaaccggccccactaaggcccccgtagca
gccgccgtggcaatgacagctccccagcaggtccagccagccttgggcccccaggggccc
ctcactcagatgccactggccccgcagagtgcagccactccggtccctggagccctggtc
gtctcccaggagatgcaggagaacgtgaagaagtgtaagaacttcctagcaacgctgatc
aagctggcatcccataattccccttcgccagagacatctcgaaacgtgaaagcgctggtg
caggatctactggatgcaaaaattgacccagaggagtttaccagccgacttcaatccgag
ctgaaatcgtctccgcagccttatctggtccctttcctgaagaaaagtctgccggcattg
cgtttgtctctactgaacagtcaacagttgctcacgcaacctctacagccaaacaaaacc
agcatctcaccagtccagactggcgtcagcgtacggccacatcaacccaacagcactact
gtactgcctcaaggcattaagagggcagcgggccctgggggtcagatacgtatgcccgtg
gtcatcacacaaacggtgcgagcggcaggtactttaggaaaaccagcagccatccagaca
tgcaaaagccccgtgggagtcacaatccagctctcaggaaaccagaaaaacaagctgaat
gacccggggggcagctcgttcagggacgatgatgacatcaacgatgtggcgtctatggct
ggggtcaacctcaatgaagagagtgctcgtatcctagcaaccaactccgagttggtgggc
acacagatccgctcctgtaaagacgaggcattcctacctaccggcctgttacatcgacgc
atactagaaacagccaagaagtttggagtgacagaagttccactggacgctgtaaacttc
atttctcacgccacccagtccagattacgaactgtagtggagaaagtttcgtccatcgcc
cagcacagaatggactcgtctaaggaggacgagtggtacgaacagtcgtctgatgttcgt
tcgcagctgaagttttttgaatatttggaacggatggagaaacagcggaaagacgaacga
gagcgagagattctcctcagagcagcgaagagtcgctcacggcaggaagacccagagcag
gcccgtttgaagcagaaagcaaaagagatgcagcaacaggaactagcccaaatgagacaa
cgagacgccaacctgacggcactcgccgccattggtccgcggaaaaaacgcaaggtggac
tcacctggagctacaacgacaggcactgaggtgttggggagttcggcagtatctccatct
ggaacatccacccctcccagctcgtcgcggcagtattcccgccagagaataacgcgcatc
aacctcagggacttcatcttctacatggagcaggagagagagaccagccgatctctctta
ctgtaccgcgctcttcttaagtag
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