Myxocyprinus asiaticus (Chinese sucker): 127416848
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Entry
127416848 CDS
T08782
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127416848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127416848
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127416848
mRNA degradation factors
5'-3' decay
Decapping complex
127416848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_HPS5
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_Prp19
CelTOS
WDR55
Pdc1_Ge1
Motif
Other DBs
NCBI-GeneID:
127416848
NCBI-ProteinID:
XP_051512378
LinkDB
All DBs
Position
26:complement(24697114..24735219)
Genome browser
AA seq
1394 aa
AA seq
DB search
MASSSNMDIEGATQHLRDILKLDRPGNSAEPSLVESQRKTSFNGELNGVVGAELIGTGGH
AAMVESTTHNSDKLNGQDTQTICLSGDDGSTCVPIRANNVEIVSSRDSSIDSKARGSNKV
KIQPVAKYDWEHKYYYGNLIAVSNTYLAYAIRGANNHSMIRVLHLGSTERSLLKGFTGAV
TDLAFAHLDSNLLGCVDEAGNMFIWQLTYHSSKIQDEVVVHIRRPDDTPLNSSRRLIWCP
FIPEDSYENPEDSCQTLALLHEDRAEVWDLDILRSNNSSWPVDATDLKEGFITIRGHSAR
ISEGALSPDGTVLATASHDGYVKFWQIYIEGQDQPRCLHEWQPHNGRPLSCLLFCDNHKK
QDPEVPFWRFLITGADQNQELKMWCTVSWTCLQTVRFSPDPFNSSVLPSLKASLDLSAEF
LILSDVQRKVLYVMELLQDQEKGRASFTAVSEFLLTHPVLSFGVQDVTRARLRHTEVLPP
DEESESMTTEGSQGLSESKSGIQIKLYCVHTKSLQDVQIWFQPSEGASSSLFLSQSGSQD
GFGFCDHLADLNVEAMSSDKESGDSGSQNDLSKILPLPTPADFMSPAPSALPKLMTPDAF
MTPSTSMPASPGSCASSLTIVTATSSSDSGARCGDDFTQSPKMSVDCGSSSLNLSASASS
PRSNPILISGLGENIQVPPPNPPLSLDLQALDPMAVPQASPTRARSPDVISSASTAMSQD
IPEIASETFQRGMAVAAADPRDSVPALHTDSMASAASVLHLLSPRARSCAEHSLLPLERG
AAAVDGEQRLNNTPSLLETALSQENAVAAAGSCSDSSVNHAWPAAPDITRETRNSLRDNG
LGDCSREEMKDRHISSPYHRRTYHLTQNDSQDASAEQSDHDDEVASLASSSGNCGPRSSH
RLPVKDWKTSPRSSPKLKRKSKKDEGESSQSRQIDSQMSTEVQDELLQMLRSQQREIAEL
RQSQLELLQRVTSHMDAVQSSLMAHIEHTMLAQQEQEQRRMERFLTEGQSRNQQLQDQLV
QQLAQSLNNSLSNRLDKVLREELKKTVPQTISKILEPVTGQMSNTIAAKLTAVEATLKEN
VTKVVKSKNTTDAIGRAVAEAMQGPIQAAYKETFQSIVLPVFERGCQSMFQQINDSFKQG
THEYIQQLETHIKNRKQQDQDAQDPVIGQLQQMIDTLQSSQDQLATTVTASVSSDVQHQL
HMIVGNLQDSILTQVQRIVKGEVSLAMKEQQAAVTSSIMQAMRSAAGTPVPTAHLDYQAQ
QASILQLLQQGQLNEAFQQALSAADLNLVLYVCETVDSQKVFGQQPCPLHQAVLLSLIQQ
LSTNLSTRTELKIIYLEDAVMNLDHGDPITRDHMSAVLSQVRQKLLHFLQQDAHSPLSKR
ARRLMMMMQGLVNH
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagttccaacatggacatagagggcgcgactcagcatcttcgggacatctta
aaactggatcgtcccggtaattcggccgagccctctttggttgagagccagagaaaaaca
tctttcaatggcgagttgaatggagttgttggagctgagctgatcggaacaggtggacat
gcggcaatggtggagtcgactactcacaactcagacaagctcaatggacaggacacacag
accatttgtctttcaggagatgatgggtccacatgtgtgcccattagagcaaacaatgtg
gaaattgtgtccagtcgtgactctagtattgacagtaaggctcggggcagcaacaaggtt
aaaattcagccagtggccaaatatgactgggaacacaagtactactatggcaatttaata
gctgtgtcaaacacatacctagcttatgccatcagaggcgcaaacaaccattctatgatc
cgtgtgctccacctgggttcgacagagcgctccctgctgaagggtttcactggtgcagtc
acagaccttgcctttgcccacttggactccaacctgttgggctgcgtggatgaggctgga
aacatgttcatttggcagctcacctatcacagcagcaaaatacaggatgaagtggtagtt
cacatccggaggcctgatgacacaccactgaactccagccgcagacttatctggtgtccc
ttcattccagaggacagttatgagaacccagaggattcatgtcagacactggcacttcta
catgaagacagagctgaggtttgggaccttgacatcctccgatccaataacagctcatgg
cccgtggatgccactgacttgaaagagggcttcatcactattagagggcacagtgcacgc
attagtgagggagcactgtcccctgatggcactgtgttggctacagccagtcacgatgga
tatgtaaagttttggcagatctacattgaaggacaggaccaacccagatgcctgcatgaa
tggcagccacataatgggcgtcctctttcttgcctgctcttttgtgacaaccacaagaag
caagacccggaagttccgttctggcgcttcctcatcactggtgctgatcagaaccaggag
ctgaagatgtggtgtacagtatcatggacctgcctacaaactgtcaggttttctccagat
ccattcaacagtagtgtgttacctagtctgaaggccagtttggacctatctgcagagttt
ctcattcttagtgatgttcagaggaaggtgctgtatgtaatggagctgttacaggatcag
gagaaaggccgcgccagcttcactgcagtttctgaatttctgcttacacacccagtgctc
agcttcggtgtacaggatgtcacccgtgcacgactacgccacacagaagttcttccccct
gatgaggaaagcgagagcatgactacagaggggagccagggactctcagagtctaaatca
ggaatccagattaagctctactgtgtgcatacaaaatcactacaggacgtgcagatctgg
ttccaacccagtgagggggcctcatcctccctctttttgtctcagtctggatcccaagat
ggctttggtttctgtgaccacctggcggatctgaatgtggaggcaatgagctctgataag
gagtctggtgatagtggctcacagaatgacttgagcaagattctgcctcttccaactcca
gctgacttcatgagtccagccccatcagccttgcccaaactcatgaccccagatgccttc
atgacccccagcacctctatgcctgcctctcctggcagctgtgccagcagcttgactatt
gtaacagccacaagcagctcagacagtggggcaaggtgtggagatgattttacgcagagt
cctaaaatgtctgtagactgtggcagcagcagcttaaatctgagtgcaagcgcaagcagt
ccaagatccaaccccatcctcatctcaggccttggggaaaacatccaggttccccctcca
aacccccctctctccctggatctccaagctttagatcccatggcagtcccccaggcctct
cctaccagagctcgctctccggatgtcatctcctccgcctctacagccatgtcccaagac
atccctgagatcgcctcagagactttccagagggggatggccgttgccgctgctgaccca
cgggactctgtccccgctctgcacactgacagcatggcgtcagctgcatcagtcctccac
ctgctgtctccgagagcccggagctgtgcggagcacagtttgctgcctctggagcggggc
gcagcagctgtggatggggaacagagactcaataacacaccctcactgctagagaccgct
ttgtcacaggagaatgcagtggctgctgccggatcctgttctgacagcagcgtgaaccat
gcatggcccgcagcacccgatatcacacgggagactcgcaacagcctgagagacaatggc
ctgggagactgttctagggaggagatgaaggataggcacatttcttctccctaccacaga
cgcacatatcacctgactcagaatgacagtcaagatgcaagtgcagagcagagcgatcat
gatgatgaggttgccagtctggcctcctcctcagggaactgtggcccccggtcttctcac
agactccctgtgaaagactggaagacatcaccccgcagctcccctaagcttaagaggaag
agcaagaaggatgagggcgagtcctcacagtctagacagattgacagccagatgagcaca
gaggtccaggatgagctcctgcagatgctgaggagccagcagagggagatcgctgagctc
agacagagccaactggagctgctgcaaagagtcaccagccacatggacgctgtgcagagc
tccctcatggctcacatcgagcacaccatgctggctcagcaggaacaagaacagagaaga
atggagcgatttctgacagagggccaaagccgaaaccaacagcttcaggaccagctggtt
cagcagctggcccagtctctaaacaatagtctttccaacaggctggacaaagttctgcgt
gaagaattgaagaagaccgtcccacagaccatttcaaagattctagaacctgtgactggc
cagatgagcaacaccattgctgccaagttaactgcagtggaagcaacactgaaggaaaat
gtcaccaaagtcgttaagtccaagaacactacagatgcgattggccgtgctgttgccgaa
gcgatgcagggccccatccaggcagcctacaaagagacctttcagagcatcgtgctgcct
gtgtttgaacggggctgccaatccatgtttcagcagatcaatgacagcttcaaacaggga
actcacgagtacatccaacagctggagacgcatatcaagaacaggaaacagcaggaccag
gatgcacaggatcctgtgattggccagctgcagcagatgattgacaccctccagagttcc
caagaccagctggccaccactgtgacagccagcgtgagctctgatgtccagcatcagctc
cacatgatcgtgggaaatttgcaggactccatcctgacgcaggtgcaacgtatagtcaag
ggtgaggtgagtctggccatgaaggagcagcaggcagctgtcacctccagcatcatgcag
gccatgcgctcggccgcaggaacgcccgtccccaccgcacacctagactaccaggcccag
caggccagcatactgcagttactacagcagggccagctcaacgaggccttccaacaggcc
ttgtccgcagcagacctgaatctggtgctgtatgtgtgcgagactgttgactctcagaaa
gtgttcggccagcagccctgtccactccatcaggctgtgctcctgtccctcatccagcag
ttatccaccaacctgagcacacgcacagaactcaagatcatctatctggaggatgctgtg
atgaatctggaccatggagatccaatcaccagagatcacatgtcggcagtgctgtcccag
gtacgacagaagctcctccacttcttgcaacaggacgcccacagccccctgagcaagcgt
gcacggcgcctcatgatgatgatgcagggcctggtcaaccactag
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