Myxocyprinus asiaticus (Chinese sucker): 127416867
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Entry
127416867 CDS
T08782
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like isoform X1
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
127416867
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
masi02000
]
127416867
Transporters [BR:
masi02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
127416867
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
127416867
NCBI-ProteinID:
XP_051512411
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Position
26:8996442..9044251
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AA seq
602 aa
AA seq
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MNRKDGQMEERGYWGSKAEFLLAVAGIVVGLGNVWRFPYLCYKNGGGAFLIPYLVFVVTC
GVPLFVLETAMGQYTQEGGITCWHRLCPLAGGIGYAGQLIVLYSCMYYIIILAWALFYLV
FSFSSQLPWDSCDNTWNTDDCVNLAAKNLTLNWTTQINSTSSVTEFWERRVLSISGGIEE
IGKINWEILLCLIAMWIICYFCVWKGVKSTGKVVYFTATFPYMMLLVLLIRGLTLPGALQ
GVVFYLYPEPARLSDPQVWMEAGAQILFSYSLGTASLTVLGSYNKYNNNCYRDSLLLCLL
NGSTSVVSGFAVFSVLGFMAHKQGVPIEVVAESGPGLAFIAYPQAVAMMPLPQLWAACFF
IMIILLGLDTQFVAMEVIMTSVTDLFPMVLRKVGRREIFLLLFCLICFFCQLVMVTEGGM
YVFQLFDYYACSGACLLFLTVFESLAMGWIFGAERMFDAIEDMTRSRPNCIFKLCWKYLT
PLVSLASFICSLVEYKPLTFNRSYVYPSWAYALGWLLALSSILLVPGWVLVRLIDGKGSL
KQRLLHLCSPDTNLPLTCKQPAEIQEMILTAEMEDLVSSTEENQMKENKNSNTRISCGPS
FQ
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaaaagatggacaaatggaagagagagggtattgggggagtaaagcagagttt
cttctggctgtggcaggcattgtggttggattagggaatgtgtggaggtttccctatctc
tgctacaagaatggaggaggggcattcttgataccctacctggtgtttgtggttacctgt
ggagtgcctttgtttgtgctggagacggcgatgggacagtacacacaggaaggtggcatc
acatgttggcatcgcctctgtccactggctgggggtattggttatgcaggacagctgata
gttctgtatagctgcatgtattacatcatcattctggcctgggcacttttctatctcgtc
ttctctttcagctcccaacttccatgggacagctgtgacaacacctggaacacagatgac
tgtgtaaatcttgctgcaaagaatctgaccctcaactggacaacacagattaattcaact
tcttcagttactgagttctgggaacgcagagtattgtcaatctctggaggcattgaggag
attggtaagatcaactgggagattcttctgtgtctcattgcaatgtggatcatatgttac
ttttgtgtctggaaaggagtcaaatctacaggcaaggtggtgtatttcacagccacattt
ccttacatgatgttactggtgttgttgatacgtgggctgactctgcctggagccctgcag
ggggttgtgttttacctgtatcctgaaccagcccgtctctctgacccacaggtgtggatg
gaggcaggagctcagatccttttctcttacagtttggggacagcctctcttactgttcta
ggcagctacaataaatacaacaacaactgctacagggactccttgctactttgcctactg
aacggtagcaccagtgtggtgtctggctttgcggtgttctcagtcctgggcttcatggcc
cataagcagggtgtacccattgaggtggtggcagaatcaggtccaggcttagcttttata
gcttatccacaggcagtagctatgatgcctctccctcagctttgggctgcatgtttcttc
atcatgatcattttgctcggtctggatacacagtttgtcgcaatggaggttatcatgacg
tcagtgacagatctgtttcccatggtgctgcgcaaagttggacgtcgagaaatatttctt
ctgctcttctgtctcatctgcttcttctgccagcttgtcatggtcacagaggggggaatg
tatgtattccagttgtttgactactatgcctgcagtggagcctgtcttcttttcctcact
gtgtttgagtctctggccatgggttggatctttggggctgagagaatgtttgacgccatt
gaagacatgacaagatcacggcccaactgcatattcaagttgtgctggaaatatctgact
cctcttgtgtccctggcatcttttatctgttctctggttgaatacaagcccctgactttc
aaccgctcatatgtgtatccaagctgggcgtatgcactcggctggctgctggccctgtcc
tccattctgttggtgcctggatgggtactggtccgacttattgatggcaaagggagcctg
aaacagcgtttgcttcacctgtgtagtcctgacacaaacctcccgctcacctgtaagcaa
ccagctgaaatacaggaaatgattttgaccgcagaaatggaagacttggtcagcagcaca
gaagaaaaccaaatgaaggaaaacaaaaattcaaacactcgtatatcctgtggtccatct
tttcaatag
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