Myxocyprinus asiaticus (Chinese sucker): 127416950
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Entry
127416950 CDS
T08782
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127416950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127416950
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
127416950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
127416950
NCBI-ProteinID:
XP_051512539
LinkDB
All DBs
Position
26:complement(14717315..14745262)
Genome browser
AA seq
716 aa
AA seq
DB search
MSTEPAPDQAAEYIPEKVKKAEKKLEENLYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKHEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRSIFKKAREDPRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSMSPEK
SGEIWARFLAFESNIGDLASILKVERRRFLAFKDEYEGKETALLVDRYKFMDLYPCSPCE
LKALGYKDVSRAKYAALIQEAVVTPSAPALKDEVDRKPEYPKPDTSQMIPFQPRHLAPPG
LHPVPGGVFPVPPTAVVLMKLLPPPSCFTGPFVQVDELMESFRRCVLPETVDGAVELITG
KQLEMASEGNGPVENHTLANKSLKRPNADSDEEEDKGSIAPPIHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgaacctgcaccagaccaggcggcggagtacatcccagagaaggtgaagaag
gcagagaagaagttggaagaaaatctgtatgacctcgacgcttggagcatactgattcga
gaagcacagaatcaacccatagacaaagcaaggaagacatatgagcgacttgtcgcccag
tttcccagttcgggcagattctggaaactatacattgaagctgagatcaaggctaaaaac
tatgacaaggttgaaaagttatttcaaaggtgcttaatgaaggttctgcacattgacctg
tggaagtgctacctctcatatgtccgtgaaaccaaaggaaaactgcccagctataaggaa
aagatggcgcaggcttacgattttgccttggataagattggaatggagattatgtcctat
cagatttgggtggattacatcaatttcctcaaaggagtagaggccgtggggtcatacgca
gagaatcagcgcatcacagccgttagacgtgtgtaccagaggggctgcgtcaaccccatg
attaacattgaacagctatggagggattacagtaaatatgaagagggcataaatgtgcac
ttggccaaaaagatgattgaagaccggagcagggactacatgaacgccagaagagttgcc
aaggagtatgagacagtgatgaagggtttggaccggaacgccccctcagtgccaccccag
aactccccacaggaagcccagcaggtggagatgtggaagaaatacatccaatgggagaag
agcaacccactgcgcacagaagatcagacactcatcaccaagagagttatgtttgcctat
gagcagtgtcttttggtactgggacatcatcctgacatctggtacgaggctgcccagtac
ctggaacagtccagtaaactgctggcggaaaaaggggacatgaataatgccaagctgttc
agtgacgaggcagcaaacatttacgagcgtgccataggaactctactcaagaagaacatg
ctgctttatttctcttttgcagattatgaagagagtcgcatgaagcatgagaaagttcat
agtatatacaatcgccttctggcaatagaagacattgaccccacattggtttacattcag
tacatgaagtttgccagaagagccgagggcatcaagtccggccgctccatctttaagaag
gccagagaggaccctcggacacggcatcatgtgtacgtcactgctgctcttatggaatac
tactgcagcaaggacaaatctgtggcctttaaaatatttgagcttggactaaagaaatat
ggtgacattcctgagtacattttggcctacattgattacctctctcatctaaatgaggac
aacaacacccgagtcctgtttgagagagtccttacgtctggaagtatgtcccctgagaaa
tctggtgaaatctgggcacgcttcctggcctttgagagcaacatcggggatttggccagt
atcctaaaggtggagcgaaggcgcttcctggccttcaaggatgagtatgagggcaaggaa
acagctctgctagtggaccgatacaaattcatggatctgtatccctgctccccctgtgag
ctcaaagccctcggctacaaggacgtgtctcgtgccaagtatgcagcactgatccaagag
gcagtggtcactccctctgccccagcactgaaagacgaggtagaccgcaaacccgaatac
cccaaacctgacaccagccagatgattcctttccagccacgccatcttgcacctcctgga
ctgcaccctgttcctggaggagtctttcctgttcctcccactgctgttgtcctcatgaag
ctgctgcctcctcccagctgttttacaggtccctttgtgcaagtagatgagttaatggaa
tctttcagaagatgtgtactgccagagacggtagacggtgctgtagagttgatcactggc
aaacagttagagatggccagcgaaggcaacgggcctgtggagaaccacactttggcaaat
aaatccttgaaaagaccaaacgccgattcggatgaggaggaagacaaaggatccatcgca
cctcccatccacgacatctaccgagcacggcagcagaagaggatccgatga
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