Myxocyprinus asiaticus (Chinese sucker): 127417185
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Entry
127417185 CDS
T08782
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127417185
03041 Spliceosome [BR:
masi03041
]
127417185
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
127417185
Spliceosome [BR:
masi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127417185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
127417185
NCBI-ProteinID:
XP_051512972
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All DBs
Position
3:complement(19146988..19157301)
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AA seq
343 aa
AA seq
DB search
MMMMMMDEDQPKTLYVGNLSRDVTEALILQVFSQIGPCKSCKMIIDTAGNDPYCFVEFYE
NRHAAAALAAMNGRKILGKDMKVNWASMPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAF
APFGKISDTRVVKDLATGKSKGYGFISFINKWDAEGAIQQMNGQWLGGRQIRTNWATRKP
SAPKSNNEASNKHLSYEEVLNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVF
PEKGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKETADMRSMQQMQLPQQNKPTY
PAQSYGQWGQSYGNGQQMGQYMANGWQMPYGVYGQAWNQQGYK
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatgatggacgaggatcagcccaagacattgtatgtcgggaacctctcc
agggacgtgacggaggccctcatcctacaagtgttctcccagatcggcccctgcaagagc
tgtaaaatgatcattgatacggctggaaacgacccatactgctttgtggagttctacgag
aacagacacgctgctgcagctctggctgccatgaacggcagaaagatattaggaaaggat
atgaaagttaactgggcctcaatgccaagcagtcagaagaaagataccagtaatcatttc
catgtctttgttggtgacctaagcccagaaatctctacagatgacgtcagggcagccttt
gctccttttgggaagatatcggacacccgtgtggtgaaggacttggccacaggcaaatca
aaaggatacggttttatctccttcattaataaatgggatgcagagggtgccattcagcaa
atgaatggccagtggctgggaggcagacagatcagaacaaactgggccacaaggaagccg
tctgctcccaaatcaaacaatgaagccagtaacaaacacttgtcctatgaggaggttctg
aaccagtcgagtcccagtaactgcactgtgtattgtggtggaattgcttctggcctttca
gatcagctgatgagacagacattctcaccatttgggcagataatggagatccgggttttc
ccagagaaaggctactcatttgtgaggtttgactctcatgagggtgctgcccatgctata
gtgtccgtgaatgggacctgcatcgagggccacactgtaaagtgctactggggcaaagaa
acagccgatatgagatccatgcagcaaatgcagttgccgcagcagaataaacctacctat
cctgcccagtcttacggacagtggggccagtcatatggcaacggtcaacaaatgggccag
tatatggccaatggctggcagatgccttatggagtctacgggcaggcctggaatcagcag
ggatataaataa
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