Myxocyprinus asiaticus (Chinese sucker): 127417275
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Entry
127417275 CDS
T08782
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127417275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
masi03009
]
127417275
Ribosome biogenesis [BR:
masi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
127417275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
NBCH_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_SPT8
BBS2_Mid
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR19_1st
PEP5_VPS11_N
VPS11_N
Beta-prop_NUP159_NUP214
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
127417275
NCBI-ProteinID:
XP_051513132
LinkDB
All DBs
Position
26:complement(43025087..43043358)
Genome browser
AA seq
515 aa
AA seq
DB search
MASFKPTKIQTYPKLGEKVTEDTLYWQNYKAAVQIKEFGAVTKIDFSPLPPHNYAVTAST
RVQVYGPHSQEPIRSFTRFRDTAYGGSFRGDGKLLVAGSEEGLIRLFDIGGRVALRQFKG
HSKAVHATSFLSDGFRVMSGSDDLSCRVWDVASGTELGSFTEHTDYIRAAAPSKLNPDLF
VTGSYDHTVKLFDVRSGGSVMTIQHGHPVECVLLYPSEALLVSTGGRYVKIWDLLKGGQQ
LVSLKNHHKTVTCACLSSTGNRLLTGSLDRHVKVYNSSYKVIHNFDYAASILSLAVAPDD
EVVAVGMTNGVLSVRHRKHKEDKESLIGRRRRGPAYRVFVKGKNFVPKQDDFLVSKAVKQ
HLQKYDKQLKSFQVSKALDTALETWRRTSKPEVTVAVIMELNRRGTLKNALAGRNEESLT
KILNFLLKHITDPRFSRPLLTVGDIVLDLYQQVIPQSPIVERLLQRLMELLGREADLQQE
LLQVLGILDTLFASLTPRREVAALQPVQGSQLQAA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatttaaacccactaaaattcagacgtatccgaaacttggagagaaagtgaca
gaggatacactgtactggcagaattataaggctgctgtgcagattaaagagtttggtgct
gttacaaagattgacttctctccactcccacctcacaattatgcagtcacggcatcaact
agagtccaggtatatggccctcactctcaagagcccatacggagctttactcgtttccgg
gatacggcgtatggggggagtttccgaggtgacgggaagcttttagtggccggaagtgaa
gaaggactcatccgtctgtttgacatcggcggtcgagtggctctcagacagttcaaagga
cactcaaaggcggtacatgcaacctcattcctgtctgatgggtttcgtgtgatgtctggc
tctgatgatctgtcgtgtcgtgtgtgggatgttgccagtggtactgaactcggatcattc
actgaacacacagattatatcagagctgctgctcccagcaaactcaaccctgacctcttt
gtcacaggttcatatgatcacacagtgaaattgtttgacgtgcggtcaggaggcagtgtg
atgacaatacaacatggccaccctgtggagtgtgtgctgctgtatccttcagaggccctg
ctggtgtccacaggagggcgctatgttaaaatttgggatctgttgaaaggcggacagcag
cttgtttctcttaagaatcatcacaaaaccgtgacgtgtgcatgtctgagctctactggg
aacagactacttacaggctcactggacaggcatgtcaaagtgtacaactcctcgtataag
gtcatacacaatttcgactatgcggcatctattctgagtctggctgtggcgcctgatgat
gaggttgttgctgtgggaatgaccaatggcgtgttgagtgtcaggcacaggaaacataaa
gaagacaaagagtcgttgattggtcgaaggcgacggggtcctgcataccgagtctttgtc
aaggggaagaactttgtccctaaacaggatgatttcttggtcagtaaagcagtgaaacaa
catctacagaaatatgacaaacagctaaaaagcttccaggtgtccaaagctctggacaca
gctctggagacatggagacgcaccagtaaaccggaggtgactgtagccgttataatggag
ctgaaccgcagaggaactctgaagaacgctcttgcaggacgaaatgaagagagcttaacc
aaaatactcaacttcctcctcaaacacatcactgacccacgcttctctcgtccactgctc
acagtcggagatattgttcttgatctgtatcagcaggttattccccagtctcctatagtg
gaacggttgctacagcgtttgatggagctgttgggtcgggaagcagatcttcagcaggag
cttcttcaggtgttgggcatcttggacactctttttgcatcactgacccccaggagagag
gtcgctgccctgcagcctgtgcagggctcacagctgcaagccgcctga
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