Myxocyprinus asiaticus (Chinese sucker): 127417329
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Entry
127417329 CDS
T08782
Name
(RefSeq) golgin subfamily B member 1-like isoform X1
KO
K20478
golgin subfamily B member 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
masi04131
]
127417329
Membrane trafficking [BR:
masi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
127417329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC39
TMF_DNA_bd
OVT1
WDR18_C
Motif
Other DBs
NCBI-GeneID:
127417329
NCBI-ProteinID:
XP_051513238
LinkDB
All DBs
Position
26:3728418..3791916
Genome browser
AA seq
3083 aa
AA seq
DB search
MLKWFSADEGGSAHGAPGSPLVDVSVNAPTLSEVTERLMQMEELVTQLKELIREKDATLC
SKDEQLKVERESYELKLSKIRLQNKAKVTSLNSQLEELRKNQERKEQGSPARFKQSGTGE
AGDSESAAANRGKILRFRKKVEDLEQQVAQRDQELKQKIQELEAQRERGSAMDAMLADRA
KLLTEKEAYIVHLQMALSGEQPVPQQSNEGSVNELKLMVLSLTKNVGDGEERCSLLQEQV
DSLRELLMSEKTQFEEKENMYKSNIQTFKDIILQKDNTLMEIRQTHEQELFKLVAKSDAS
ADLEQLLTALKQKLHEKEEVLLGKTQVIDVLQVEVDGRDQQIKELTEGMQHLQRERENLQ
SKLEAERHIARARLRDLMEKHEAELQRAAEKHNSEMSEKEQALRRQLETLQRSTALPSDV
PANPPTCITAQRITELEAHAKLKADEASKAEAKFLKMKAWSKSRIRQLEEELRKVQSGIC
TNMSPDVTSLRSRVTELEEEREEMFCKLELYEEMKAKNDELQKQLVEYEDQQRKMQADLE
QVTKRAASQASETGSMDDFQSQVMEWQEMVTMVMESEGVRDQGHEKHAMAFRMSHIEEER
EGLIEDDWLFPGCSDPALAKRQQDVEEELAQAHGLHPQKSRKPKHFTPRSLQEDLEFHNR
QSFPDPKDSTGCDVFMDGENMGGWWPKHGAADTDGLRSVVEELELERNQLQEQILGLEER
CQDLEDRLQLQARIELLQVTFGIDEGGRAISQNELERLQAQVTSLRSQQVKDAEKHQLLV
TSLNEQLKGLNSTQECLESSLIEKEHTLAKTSEKLECIESLREALRTKEKQHKDTAEKLL
QTEHNLAEVMKKCSIFEKENSEVKATVAELTQKISVLKDKMQKHEVTIESLQSDLVQTND
ELDRLNIAHLEERAQLIHDMQSCERKIDSLKDIITDKDKEILALSSSTTEYSEQIHELKQ
QIKLKEAALANVEPEVQTIRDPQHSDQQSFNTLIAELMEQLKKTESDLNVAKIEGESKSN
DIKGLMKQIEEDKKTIQDLRMDIQKLNMNQKDQLLDSELMLEKELKFLKEERNKLLAEVT
KHESELQTLSRELEEKFACQEPLKQDVQEKSKMIFSLEQRLQIVQEEAEGERTRYRTELK
TRDETNEQLEKELSGKNESITKMKAHIKSLQNDNQKLKDSLEENFEELEKQKQLLDNVKK
EMHAVQDQNSSLLLQVKSLMDENCRLKQIIETGSQSLSDVLEEKNILLAKISEAELQLLG
SKKTIENLQKENEDLTLRGAELKKELEQSKQSMSVMLLEKSNECSQHSTLLRESGEIISS
LQVQIESLNNQADQSNSCMAEKERTIAEKNALIESQKCQLLQLQEALTRFQEQEATLKAE
LTEKDDTMKFLKEECNQLTTAVTKQKSEIHNISKQFEEQVANQEQLKQDVQEKSKKIFSL
EQRLQFVQEEAEEERTRYSTEIKTRDEAMEKLEKELSGKNESITKMKAHFKSLKNDNQKL
KESLEENFEELEKQKQLLDNVKKEMHAVQDQNSSLLLQVRSLTDENCRLKQIIETGSQSL
SDVLEEKNILLAKISETELQLLGSEKTIEDLQKEKEDLTLRGAELKKELEQSKQSMSVML
LEKSNECSQHSTLLRESGEIISSLQVQVESLNSQANQSNSCMAEKERTIAEKNALIESQK
CQLLQLQEALTQFQEQEATLKAELTEKDGTMKFLKEECNQLTTAVTKQKSEIHNISKQFE
EQVASQEQLKQDVQEKSKKIFSLEQRLKIVQEEAEGERTRYSTEIKTRDEAMGKLEKELS
GKNESITKMKAHFKSLKNDNQKLKESLEENLGEFVRQKQLLDNAKEDMHAVQDQSSSLLL
QVKSLTEDNCRLKQIIETGSQSLSDVSEQKNILLAKISEVELQLLESAKTIEDLQKEKED
LTLRGAELKKELEQNKQSMSEMLLEKSNECSQHNTLLRESKEIISSLQVQVESLNNQVDQ
SNSCMVEKENTIGEKNALIDSQKCQLLQLQEAITQLHELEATLKSELMEKDGIIQAQSAQ
GTSLQSELQQQRQYLSKVQSEFDSLKNECTQLTGSLQKSETALSNRTHECQTHIDELRER
SESVALLSEQLAAVNKINVRLESEIMAMKTAQDILFSDKNKLEEELAQIQARAVRLNDHV
QSLNSQNQQLQAMFEGKEKEVLLLTQVVSETNNKVAITTKENENLVSQVVSLCEQNKNLQ
EQTTEQTKSLTEMTKETNALQNKISILETQDVENNKIIEDLFKHMEGLLLQAEELKVFKQ
KQQSGAESLQEMSSECAALSKRLGEAEEEVALLKGELESSSSQIIHYNRVVLEKDKILKD
QSTQMEAYQHQLEHLHETLSILKEQANAHNSGLIEKDVLLQKESNSCSLLQKELGHEREL
VLNLQHEIESLKVECSRLNHSLEAQQSSLREKTLESQNHKEELVKRNEYVLSLTAQLGIM
NENNVKLKSENANLKCTLEQHSTESARLKEELRQKQLELVEHQDNVQALTEQNSTIKSEL
KRSVAELFRQQEMITSLQSELATRNEKLASLTEQIETEHSGNDVLQLTLQEKEAALRAQE
MHVNKLQDKLLESESQISQKIKVISELQIAAQSFQTALQDKDNLLLNKEQEFSLVKTALM
AESEACKAQQKLEMDAVATLQRDLQNLLEKNKHLMSVVDEKDFLLRQEQEKYLCLQGSAA
ELENTKSQLNCQIKRLTLEAAQLRETQTEKEQVVFAAQSQIQKLDELYKKLQEEYNLTKQ
ELYKVINEKSLKEEEVCKLVLEKEEICRNSSLQIQRIQEQVQHDQQQSCTMNDMEEEMKM
EREQLHIQQESMWGTDVSPEHWVQLHSRLQHSQLEIQQREFGLQQLNIKLQQAIEEKAGV
SAQLSTVSQMLRDTQETVNELQNRCYWLERQSQIQYSAVQQGSVSAEVPPGAPQERVSAL
HIPDASDSRDLRIRLTEAELHLSQLNSRLEEERSRREAAEEAVRLTEQRVTSMESNTSWS
SQRDFSIELETDEEQYEALILDPNQHLLMRKMKSGVHLCRRWLKGRSTYCSKLLTSRAKS
RYIFMAYLLTLHVLVFMCLSGAL
NT seq
9252 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtggttttcggcagatgagggcggctctgcccatggagcccctggctctccg
ctggtggatgtgagcgtcaatgccccaacgctctctgaggtcactgagcggctaatgcag
atggaggaactggtgactcagttaaaagagctgatcagggagaaagatgcaacactctgc
agcaaagatgaacaacttaaggtggagagggagtcatatgaattgaagctttccaagata
cgactgcaaaacaaagcaaaagtcacctcactcaactcccaacttgaggaattacggaaa
aatcaagagcgcaaagagcagggcagtcctgctcgtttcaaacagagtggcactggagaa
gccggtgattcagaatcggctgctgccaaccgtgggaaaattctccggtttagaaagaag
gtggaggatctagagcagcaggttgctcagagagaccaagaactgaagcaaaagatccag
gagctggaggcccagagagagcgaggttctgctatggatgccatgttggctgacagagcc
aaacttcttactgagaaggaagcctacattgtgcacctgcagatggctttatctggggaa
cagccagttccacaacaaagcaatgaagggtctgtgaatgagctgaagttaatggtgctg
agcctaacaaagaatgttggtgatggggaggaaaggtgcagcctactccaggagcaggtg
gacagcctccgagagctcctaatgtctgagaaaacccagtttgaggaaaaggagaacatg
tacaagtccaatatccaaacattcaaagatatcattttacaaaaagacaacacactaatg
gagatcaggcagacacacgaacaggagctgttcaagcttgtagcaaagtcagacgctagc
gctgacctcgagcagctcctgactgctctcaaacagaaactccatgagaaggaggaagtt
cttctgggtaaaacacaagtgattgatgtcctgcaggtggaggtggatggtagagaccag
cagataaaggagttaacagagggaatgcaacacttgcagagagagagagagaaccttcag
tcaaagctggaggcagagcggcacatcgctcgggcccggcttagagatctgatggagaaa
catgaggctgagctgcaaagggctgctgagaaacacaacagtgagatgtcagagaaagag
caggcactgcgcagacagctggagaccctgcagcgatcaactgcactgccctcagacgta
cctgcaaacccgcccacctgcatcacagctcaaagaatcacagagctggaagcccatgca
aaactgaaagcagacgaggccagtaaagcagaagctaagttcttaaagatgaaagcgtgg
tccaagtctcgtatcaggcagctcgaggaggagctcaggaaagttcagtctgggatttgt
accaatatgtcccctgacgtcacgtccctgcgcagtcgtgttacagaactggaagaggag
cgagaagaaatgttttgcaaactggaactgtatgaagagatgaaggctaaaaatgatgaa
ctgcaaaagcagctcgtggagtatgaggatcagcagaggaagatgcaggccgacctggag
caggtgaccaagagagcagcatcacaggcgagtgagaccggcagcatggatgattttcag
agtcaggtgatggagtggcaggagatggttaccatggtgatggagtcagagggggttcgg
gatcagggtcacgagaagcatgccatggccttcagaatgagccacatcgaagaggagaga
gagggactgattgaggatgactggttgtttcctggctgctccgatccagcattagccaaa
cggcaacaggacgtagaggaggagttggcccaggcccatggtctccacccacagaaaagc
aggaagcccaaacatttcactccacgcagcttgcaggaagacttggagtttcataatagg
cagtctttcccagacccgaaagattccactggttgtgatgttttcatggatggagagaat
atgggtggatggtggccaaagcatggtgctgcagatacagatggcttacgatcggttgtc
gaggagcttgaactagagagaaaccaactgcaggagcagattctgggacttgaggagcga
tgccaagatctagaggaccgactgcaacttcaggctcgtattgaattgttacaggtgacg
tttggcatagatgaaggtggtcgagccatatctcagaatgagttggagcgcctgcaggcg
caggtcaccagccttcgcagtcagcaggtcaaagatgcagaaaagcaccagctgctcgtc
accagtctgaatgaacaacttaaaggactgaacagcacacaggagtgtttggagtcttcc
ctcatagaaaaggagcacactctcgctaaaacctctgagaaactggagtgtattgagagt
ctgagagaggctttaaggacaaaagaaaaacaacacaaagacacagctgaaaaactgctg
caaacagaacacaatctggctgaagttatgaagaaatgcagcatatttgaaaaggaaaac
tccgaggtgaaagcaactgttgcagaactgacgcagaaaatcagtgtgctaaaagacaag
atgcagaaacatgaggtgactatagaatcattgcagagtgatctggttcaaacaaacgat
gagcttgacagactgaacatagctcatctagaagaaagagcacagctcattcatgacatg
caaagctgtgagcgcaaaattgacagccttaaagatatcatcactgacaaggacaaagaa
atattagctctgtcatccagcacaactgaatattcagagcaaattcatgaactaaaacag
caaataaagctcaaagaggctgcactcgctaatgttgaaccggaagttcaaaccattcga
gacccacagcattctgaccaacagtcctttaatacccttatagctgagctgatggaacaa
ttgaagaaaacagaaagtgatctaaatgtggctaaaatagaaggagaatcaaagagtaat
gatattaaaggcttgatgaagcaaatagaagaggacaagaaaacaattcaagatctcaga
atggatatacagaagttgaatatgaatcagaaagaccagctgttggattcagaactaatg
cttgaaaaagaactgaaattcctcaaggaggaacgtaataagcttcttgctgaagtgacc
aaacatgaaagtgagctacagactctttctagagagcttgaggagaagtttgcatgtcaa
gaaccgctcaagcaagatgtccaagaaaagtcaaagatgatattctcattggagcagagg
ctacaaattgtacaagaagaggcagaaggagagaggactagatatcgcacagaactcaag
actagagatgaaaccaatgaacagctggagaaagaattgtctggtaaaaatgagagtatt
actaagatgaaagcccacattaaatctttgcagaatgacaaccagaaacttaaagactca
cttgaggagaattttgaagagcttgaaaaacaaaagcagctcttggataatgtcaagaaa
gaaatgcatgctgtgcaagatcagaattccagcctgctattacaagtcaaaagtctcatg
gatgaaaattgtcgattaaagcagataattgagactgggagccaatctctctctgatgtt
ttggaagaaaagaacattttgttagccaaaatatcagaggctgaattgcagcttttagga
agtaagaaaacaattgaaaacttgcagaaagaaaatgaagacttaacactcagaggagct
gaattgaagaaagaacttgagcaaagtaaacagtcaatgtctgtgatgttgttagagaag
tcaaatgaatgcagccagcatagtacattgctcagagagagtggagaaattatttcatct
ttacaagttcaaattgagtctttaaacaatcaggccgaccagtcaaactcctgcatggct
gagaaagaaagaactatagctgagaaaaatgcattaattgaatcccagaaatgccagctt
ctgcaactccaagaggctttaactcgatttcaggaacaggaagctactttgaaagctgaa
ctaacagagaaagatgacacaatgaaattcctcaaggaggaatgtaatcagcttactact
gcagtcaccaaacaaaaaagtgagattcataatatttctaaacagtttgaggagcaggtt
gcaaatcaagaacagctcaaacaagatgttcaagaaaagtcaaagaagatattctcattg
gagcagaggctgcagtttgtacaagaagaggcagaagaagagaggactagatatagcaca
gaaatcaagactagagatgaagccatggaaaagcttgagaaagaattatctggtaaaaat
gagagtattactaagatgaaagcccactttaaatctttgaagaatgacaaccagaaactt
aaagaatcacttgaggagaattttgaagagcttgaaaaacaaaagcagctcttggataat
gtcaagaaagaaatgcatgctgtgcaagatcagaattccagcctgcttttacaagtcaga
agtctcacggatgaaaattgtcgattaaagcagataattgagactgggagccaatctctc
tctgatgttttggaagaaaagaacattttgttagccaaaatatcagagactgaattgcag
cttttgggaagtgagaaaacaattgaagacttgcagaaagaaaaggaagacttaacactc
agaggagctgaattgaagaaagaacttgagcaaagtaaacagtcaatgtctgtgatgttg
ttagagaagtcaaatgaatgcagccagcatagtacattgctcagagagagtggagaaatt
atttcatctttacaagttcaagttgagtctttaaacagtcaggccaaccagtcaaactcc
tgcatggctgagaaagaaagaactatagctgagaaaaatgcattaattgaatcccagaaa
tgccagcttctgcaactccaagaggctttaactcaatttcaggaacaggaagctactttg
aaagctgaactaacagagaaagatggcacaatgaaattcctcaaggaggaatgtaatcag
cttactactgcagtcaccaaacaaaaaagtgagattcataatatttctaaacagtttgag
gagcaggttgcaagtcaagaacagctaaaacaagatgttcaagaaaagtcaaagaagata
ttctcattggagcagaggctgaagattgtacaagaggaggcagaaggagagaggactaga
tatagcacagaaatcaagactagagatgaagccatgggaaagcttgagaaagaattgtct
ggtaaaaatgagagtattactaagatgaaagcccactttaaatctttgaagaatgacaac
cagaaacttaaagaatcacttgaggagaatttgggagagtttgtaagacaaaagcagctc
ctggataatgccaaggaagacatgcatgctgtgcaagatcagagttccagcttgctatta
caagtcaaaagtctcacagaggacaattgtcgattaaagcagataattgagactgggagc
caatctctctctgatgtttcagaacaaaagaacattttgctagccaaaatatctgaggtt
gaattgcagcttttagaaagtgccaaaacaattgaagacttgcagaaagaaaaggaagac
ttaacactcagaggagctgaattgaagaaagaacttgagcaaaacaaacagtcaatgtct
gaaatgttgttagagaagtcaaatgaatgcagccagcataatacattgctcagggagagc
aaagaaattatttcatctttacaggttcaagttgagtctttaaacaatcaggtcgaccaa
tcaaactcctgcatggttgagaaagaaaatactattggggagaaaaatgcattgattgat
tcccagaaatgccaacttctgcaactccaagaggctataactcaacttcatgaactggaa
gctactttgaaatctgaactaatggagaaagatggcataatacaagctcagtctgcgcag
ggcacctctttacagagtgagcttcaacaacaaagacagtatttatctaaagttcaaagt
gagtttgattctctaaaaaatgaatgtacacaattaactggcagtctccaaaaaagcgaa
acagccctcagtaacaggactcacgaatgccaaacacacatagatgagctcagagaaaga
agcgagtctgtggcactactgagtgagcagttggctgcagtgaacaagatcaatgtgagg
ttggagtctgaaatcatggctatgaagacagctcaagacattttgttttctgataaaaac
aaactcgaagaggaattggctcagattcaagctcgtgccgttagactcaatgaccacgtt
cagtcattaaatagtcagaatcaacaattacaagcaatgtttgaaggaaaagaaaaagaa
gtgcttttactgacgcaggttgtttctgaaacaaataacaaggtagcaataaccaccaaa
gagaatgaaaaccttgtttctcaagtcgtcagtctctgtgaacagaataagaaccttcag
gaacaaacgaccgaacagacaaagtctctcacagaaatgacaaaggagacaaacgcttta
caaaacaaaatttcaattcttgagacacaagatgtggaaaacaataaaatcattgaagac
ctatttaaacacatggaaggtttgcttttgcaggcagaggaactcaaagttttcaagcag
aagcagcagtctggagccgagagcttacaggaaatgtcttcagaatgtgcagccctctca
aagcgtcttggggaggccgaagaggaagtagctcttctaaaaggggagcttgagtcctcc
agttcgcagatcattcactataaccgtgttgttcttgaaaaagacaaaatcttaaaggac
caaagtacacaaatggaggcttatcagcaccaacttgagcatcttcatgagactctttca
atactcaaggaacaagccaatgctcataattcaggcttgatagaaaaagacgttctgcta
cagaaagaatctaattcatgcagtttgttacaaaaggaacttggtcatgaaagagaactt
gttttaaatctgcaacacgagatagagtctttgaaagtggagtgttctagattgaaccat
tctttggaagcacaacaaagctctttaagagagaaaacccttgagagccaaaatcacaaa
gaagaactggtcaaaagaaatgagtatgttctttcactaactgctcagcttggtataatg
aatgaaaataacgtgaagcttaaatctgaaaatgctaatttaaaatgcactttagagcag
cactcaacagaaagtgcaagacttaaggaggaattgagacagaaacaattagagctagta
gaacatcaggataatgttcaggcacttactgagcaaaatagtacaattaaatctgaacta
aagagatcagtggcagaattgtttagacagcaggagatgatcacttctctacaaagtgaa
ttggcaacaagaaatgaaaaactggcatctttgacagaacagatagaaacggagcactct
ggaaatgatgttttacaactcactctgcaggagaaagaggcagctctcagagctcaggag
atgcatgtcaataagttgcaagacaaactattggaaagtgagagccaaattagccagaaa
ataaaagtgatttctgaactacagatagcagctcagagttttcagacagctttgcaagac
aaagataatttgctgttaaataaagaacaagagttctctctggtaaagacagctttaatg
gctgaatcagaagcatgtaaagcccaacagaaattagagatggatgcagttgctacactt
cagagagatttacagaacttactagaaaagaataagcatctcatgagtgtggttgatgaa
aaggattttttattgaggcaggagcaagagaagtatctgtgcttacaaggtagtgcagca
gaactggaaaacacaaaatcacaactaaactgtcaaataaagcgactaactttagaggca
gcacaactcagggaaacacaaactgagaaggaacaagttgtttttgctgctcaatcacaa
atacagaaactggatgagctatacaagaagcttcaagaggaatataatttgaccaaacaa
gagctttataaagttatcaatgaaaaatcattaaaggaagaggaggtctgtaaattggtt
ctggaaaaggaagagatttgcagaaactccagtcttcagattcagagaattcaggaacaa
gtacaacatgaccagcagcaatcctgcaccatgaatgacatggaggaagaaatgaagatg
gagagagaacaacttcacatccagcaggagtctatgtggggtacagatgtgtctccagaa
cactgggtccagttgcacagccgactgcagcatagccagttagagatccagcaaagagaa
tttggcctccaacaactcaacatcaagttgcaacaggcaattgaggaaaaggcaggggtg
tctgcccagttgagcactgtttcccagatgctcagagacacacaggaaactgttaatgag
ctgcagaaccgctgctattggctggaaagacaatcacaaattcagtattcagctgtacag
cagggttcggtctccgcagaagtcccaccaggagccccccaggaacgggtcagtgcctta
cacatcccagatgcatcagacagcagggatctcaggatcaggctgacagaggctgagctt
catctgtctcaattaaactccagattagaggaggagagatccaggagagaggctgcagag
gaagctgtgcgcttgactgaacagagagttacaagcatggagtcaaacacatcctggtct
tctcagagggactttagcattgagctggaaacagatgaggaacagtatgaagctcttatt
ctagatccaaaccagcacctactcatgcgcaagatgaagagtggggtgcacttatgccgc
cgttggctcaaaggaaggagcacatactgttccaaactgctgacatccagggcgaagtca
cgctacatattcatggcataccttcttacacttcatgtgctggttttcatgtgcctcagt
ggtgccctctag
DBGET
integrated database retrieval system
