Myxocyprinus asiaticus (Chinese sucker): 127417405
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Entry
127417405 CDS
T08782
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127417405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127417405
03041 Spliceosome [BR:
masi03041
]
127417405
03036 Chromosome and associated proteins [BR:
masi03036
]
127417405
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
127417405
Spliceosome [BR:
masi03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
127417405
Complex B
127417405
Complex C
U2 SnRNP specific factors
127417405
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
127417405
TFTC complex
127417405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
127417405
NCBI-ProteinID:
XP_051513400
LinkDB
All DBs
Position
26:complement(22045119..22083137)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISYAIHGNFSGTKLQEIVVSRGKILELLRPDANTGKVHTLLTMEVFG
IIRSLMAFRLTGGTKDYVVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATAMCVLKTGFLFVVSEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVSCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQAQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRRFVIHPETNNLILIETDHNTYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNESLPEAIFGAPKAGSGQWASLVRMINPIQGNTLDLVQLEQNEAAFSVAVCRFSSGG
DDWYVLVGVARDMILNPRSVGGGYIYTYRLVGGGDKLEFLHKTPVEDVPLAIAPFQGRVL
VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVSDVQESLFWVRYRRNENQ
LIIFADDTYPRWVTTACLLDYDTMAAADKFGNICVVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEVIINYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaacctgaccctgcagcgggccactggcatctcctatgccatccatggc
aacttctcaggaactaagctgcaggagattgttgtttcccgtgggaagattctggagctg
ctgcgtcctgatgccaacacggggaaggtccacacactgcttactatggaggtgtttggc
atcatccgatcccttatggcattcaggctgacgggtggaactaaagactatgttgtggta
gggagcgactcgggtcgtattgtaatcttggagtaccatccctccaagaacatgtttgag
aagatacaccaggagacgtttggcaagagtggctgcagacgcatcgtaccagggcagttc
ctcgcagtggaccctaaaggcagagctgttatgataggtgccatagaaaagcagaagctg
gtatacatcctgaacagagatgcagctgcccgcctcaccatctcctctcctctggaggca
cacaaggctaatacactcgtgtaccatgtggttggagtggatgtgggctttgagaacccc
atgtttgcctgcctagagatggactatgaggaggcggataatgatcccacaggggaggct
gcagcaaacacacaacagactctgaccttctatgagctggacttgggcctcaaccatgtg
gtgcgcaagtacagcgaggcgctggaggaacacggcaactttctcattacagtgcctggt
ggttctgatggacccagcggtgtgcttatttgctctgagaactacatcacctacaaaaac
tttggggaccagccagatattcgttgcccaatcccacgcagaaggaatgacctggatgat
ccggagcgaggcatgatctttgtctgctctgccacccacaagaccaagtccatgtttttt
tttctggctcagacagaacagggagacatctttaaggttaccttggagactgatgaagag
atggtaacagagatcaggatgaagtattttgataccatcccagtggctacagccatgtgt
gttttgaagactggcttcctatttgttgtctctgagtttggaaaccattacctgtatcag
attgcccatttgggtgatgatgatgaagaaccagagttttcctctgccatgcctctggag
gagggagacacattcttcttccaaccccgtcccctaaaaaacctggtactggtggatgag
caagaaaatctttcgcccataatgtcctgccagattgctgatttggctaatgaagacacc
ccacagctgtatgtgtcatgtggcagaggacccagatctacactgagagttctgagacac
ggactggaggtgtcagaaatggccgtttctgaactgcccggtaaccccaatgctgtgtgg
actgtcaggagacatgtggaagatgagtttgacgcctacatcattgtgtcctttgttaat
gccaccctggtgctgtccatcggagaaacagtggaagaagtgacagactctggattcctg
ggcacaacacccaccctgtcctgctcgttgctaggggaagatgcactcgtacaagtctac
cctgacgggatccgtcacatccgtgcggataagcgagtcaatgaatggaagactccaggg
aagaagacaatcgtccgttgtgctgtcaatcagaggcaggtggtcattgctttgactgga
ggagagcttgtctattttgagatggacccgtctgggcagctcaatgaatatacagagagg
aaagagatgtctgcagatgtggtgtgcatgagtttggcaaacgtgccccctggtgagcag
cgctctcgtttcctggctgtcgggttggtggacaatacagtccgcatcatttccctggat
ccatcagactgtctgcagccattgagtatgcaggctcttccagctcagccggagtctctt
tgtatcgtggagatgggtggagtggaaaagcaggatgaacttggagaaaagggcaccatc
ggcttcctctacctcaacattgggctacagaacggagtgttactgcgtacagtcctggac
ccagtaaccggagacctgtctgatactcgtacccgttatctcggttctcgtcctgtgaag
cttttcagagtccggatgcaggcacaagaagctgttctggccatgtccagtcgctcttgg
ctgagttactcttatcagtctcgtttccacctgaccccgctgtcatatgaaactctggaa
tatgcttcaggatttgcgtccgagcagtgtcctgagggaatcgttgccatctccaccaac
acactgaggattttggctctagagaaactgggtgccgtatttaaccaggtggcattccca
ctgcagtacacgcctcgcaggtttgtcatccacccagagaccaacaacttgatcctgatt
gagacggaccacaacacctacactgaggccaccaaagctcagcgcaagcagcagatggcg
gaggaaatggtggaggctgcgggagaagatgaaagggagctggctgcagaaatggcagca
gcctttttgaatgagagccttccagaagctatctttggggcacctaaggcgggctctggg
cagtgggcctcactggtacgcatgatcaaccccatccagggcaacacattggacctggtg
cagctggagcagaacgaggcagccttcagtgtggctgtatgtcgcttctccagtggaggt
gatgactggtatgtgttggtgggcgtagccagagatatgatactaaatccccgctccgtt
ggtgggggatatatttatacctatcggctggttgggggtggggacaagctggagtttttg
cacaagacgcctgtggaggatgtgcccctggctattgctccctttcaggggcgagtgttg
gtgggagtgggcaaactcttgcgtatctatgacctgggaaagaagaaacttctccgcaag
tgtgaaaacaagcatgttcctaacttagtgacgggcatccacaccattgggcagcgtgtg
attgtgtccgatgttcaggagagtctattctgggtgcgctaccggcgcaacgaaaaccag
ctcatcatcttcgctgacgatacttatcctcgctgggtcacgaccgcctgcctgcttgat
tatgacacgatggccgccgctgataagtttggaaacatctgcgttgtccgtttgcccccc
aacaccagtgatgatgttgatgaggaccccacagggaacaaagcattgtgggacagaggc
ttgcttaatggagcatcacaaaaggctgaggtgataattaactatcacataggagagaca
gtgctgtccctccagaaaaccaccctcatccctggaggatcagagtccctggtgtacact
acactatcaggaggcattggtatcctggtaccgttcacctctcatgaggatcacgacttc
ttccagcatttagagatgcacatgcgctctgagtttccccctctgtgcggccgagatcac
ctcagctttcgttcctactatttccctgtgaagaatgtgatagatggagacctgtgtgaa
cagtttaactccatggaccctcataagcagaagagtgtggctgaggagttggatcgcacg
cctccagaggtgtctaagaaactggaagacatcagaacacgctatgccttctaa
DBGET
integrated database retrieval system
